Gene : Thhalv10016932m.g E. salsugineum v1.0
Defline:  (1 of 3) PTHR22763:SF44 - E3 UBIQUITIN LIGASE Genomic Order:  1464
Name:  ? Thhalv10016932m.g Secondary Identifier:  ? PAC:20180051
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum PWY-7511 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10016932m.g 0.5kb upstream 0.5kb upstream 2456 true scaffold_10: 10966293-10968748 Eutrema salsugineum
Thhalv10016932m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_10: 10966293-10966792 Eutrema salsugineum
Thhalv10016932m.g 0.5kb downstream 0.5kb downstream 2456 true scaffold_10: 10966793-10969248 Eutrema salsugineum
Thhalv10016932m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_10: 10968749-10969248 Eutrema salsugineum
Thhalv10016932m.g 1.0kb upstream 1.0kb upstream 2956 true scaffold_10: 10965793-10968748 Eutrema salsugineum
Thhalv10016932m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_10: 10965793-10966792 Eutrema salsugineum
Thhalv10016932m.g 1.0kb downstream 1.0kb downstream 2956 true scaffold_10: 10966793-10969748 Eutrema salsugineum
Thhalv10016932m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_10: 10968749-10969748 Eutrema salsugineum
Thhalv10016932m.g 2.0kb upstream 2.0kb upstream 3956 true scaffold_10: 10964793-10968748 Eutrema salsugineum
Thhalv10016932m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_10: 10964793-10966792 Eutrema salsugineum
Thhalv10016932m.g 2.0kb downstream 2.0kb downstream 3956 true scaffold_10: 10966793-10970748 Eutrema salsugineum
Thhalv10016932m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_10: 10968749-10970748 Eutrema salsugineum
Thhalv10016932m.g 5.0kb upstream 5.0kb upstream 6956 true scaffold_10: 10961793-10968748 Eutrema salsugineum
Thhalv10016932m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_10: 10961793-10966792 Eutrema salsugineum
Thhalv10016932m.g 5.0kb downstream 5.0kb downstream 6956 true scaffold_10: 10966793-10973748 Eutrema salsugineum
Thhalv10016932m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_10: 10968749-10973748 Eutrema salsugineum
Thhalv10016932m.g 10.0kb upstream 10.0kb upstream 11956 true scaffold_10: 10956793-10968748 Eutrema salsugineum
Thhalv10016932m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_10: 10956793-10966792 Eutrema salsugineum
Thhalv10016932m.g 10.0kb downstream 10.0kb downstream 11956 true scaffold_10: 10966793-10978748 Eutrema salsugineum
Thhalv10016932m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_10: 10968749-10978748 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360206 5261 Brassicaceae View MSA
123839779 5264 Brassicales-Malvales View MSA
124341553 5266 SBM View MSA
124242912 5268 Malvidae View MSA
124070952 5270 Rosid View MSA
123745999 5271 Pentapetalae View MSA
122790564 5272 Eudicot View MSA
122048435 5273 Angiosperm View MSA
123429130 5275 Viridiplantae View MSA
121349521 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain