Gene : Thhalv10017028m.g E. salsugineum v1.0

Defline:  (1 of 2) PTHR10805 - COATOMER SUBUNIT EPSILON Genomic Order:  830
Name:  ? Thhalv10017028m.g Secondary Identifier:  ? PAC:20180328

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10017028m.g 0.5kb upstream 0.5kb upstream 2483 true scaffold_10: 7952529-7955011 Eutrema salsugineum
Thhalv10017028m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_10: 7952529-7953028 Eutrema salsugineum
Thhalv10017028m.g 0.5kb downstream 0.5kb downstream 2483 true scaffold_10: 7953029-7955511 Eutrema salsugineum
Thhalv10017028m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_10: 7955012-7955511 Eutrema salsugineum
Thhalv10017028m.g 1.0kb upstream 1.0kb upstream 2983 true scaffold_10: 7952029-7955011 Eutrema salsugineum
Thhalv10017028m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_10: 7952029-7953028 Eutrema salsugineum
Thhalv10017028m.g 1.0kb downstream 1.0kb downstream 2983 true scaffold_10: 7953029-7956011 Eutrema salsugineum
Thhalv10017028m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_10: 7955012-7956011 Eutrema salsugineum
Thhalv10017028m.g 2.0kb upstream 2.0kb upstream 3983 true scaffold_10: 7951029-7955011 Eutrema salsugineum
Thhalv10017028m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_10: 7951029-7953028 Eutrema salsugineum
Thhalv10017028m.g 2.0kb downstream 2.0kb downstream 3983 true scaffold_10: 7953029-7957011 Eutrema salsugineum
Thhalv10017028m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_10: 7955012-7957011 Eutrema salsugineum
Thhalv10017028m.g 5.0kb upstream 5.0kb upstream 6983 true scaffold_10: 7948029-7955011 Eutrema salsugineum
Thhalv10017028m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_10: 7948029-7953028 Eutrema salsugineum
Thhalv10017028m.g 5.0kb downstream 5.0kb downstream 6983 true scaffold_10: 7953029-7960011 Eutrema salsugineum
Thhalv10017028m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_10: 7955012-7960011 Eutrema salsugineum
Thhalv10017028m.g 10.0kb upstream 10.0kb upstream 11983 true scaffold_10: 7943029-7955011 Eutrema salsugineum
Thhalv10017028m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_10: 7943029-7953028 Eutrema salsugineum
Thhalv10017028m.g 10.0kb downstream 10.0kb downstream 11983 true scaffold_10: 7953029-7965011 Eutrema salsugineum
Thhalv10017028m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_10: 7955012-7965011 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379329 5261 Brassicaceae View MSA
123839531 5264 Brassicales-Malvales View MSA
124351412 5266 SBM View MSA
124240512 5268 Malvidae View MSA
124061720 5270 Rosid View MSA
123739353 5271 Pentapetalae View MSA
122787483 5272 Eudicot View MSA
122042986 5273 Angiosperm View MSA
121344320 5274 Embryophyte View MSA
123426837 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain