Gene : Thhalv10017075m.g E. salsugineum v1.0
Defline:  (1 of 3) PTHR18952:SF111 - ALPHA CARBONIC ANHYDRASE 3 Genomic Order:  112
Name:  ? Thhalv10017075m.g Secondary Identifier:  ? PAC:20180295
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum CYANCAT-PWY Eutrema salsugineum pathologic  
Esalsugineum PWY-241 Eutrema salsugineum pathologic  
Esalsugineum PWY-7115 Eutrema salsugineum pathologic  
Esalsugineum PWY-7117 Eutrema salsugineum pathologic  
Esalsugineum PWYQT-4429 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10017075m.g 0.5kb upstream 0.5kb upstream 2692 true scaffold_10: 3505736-3508427 Eutrema salsugineum
Thhalv10017075m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_10: 3505736-3506235 Eutrema salsugineum
Thhalv10017075m.g 0.5kb downstream 0.5kb downstream 2692 true scaffold_10: 3506236-3508927 Eutrema salsugineum
Thhalv10017075m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_10: 3508428-3508927 Eutrema salsugineum
Thhalv10017075m.g 1.0kb upstream 1.0kb upstream 3192 true scaffold_10: 3505236-3508427 Eutrema salsugineum
Thhalv10017075m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_10: 3505236-3506235 Eutrema salsugineum
Thhalv10017075m.g 1.0kb downstream 1.0kb downstream 3192 true scaffold_10: 3506236-3509427 Eutrema salsugineum
Thhalv10017075m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_10: 3508428-3509427 Eutrema salsugineum
Thhalv10017075m.g 2.0kb upstream 2.0kb upstream 4192 true scaffold_10: 3504236-3508427 Eutrema salsugineum
Thhalv10017075m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_10: 3504236-3506235 Eutrema salsugineum
Thhalv10017075m.g 2.0kb downstream 2.0kb downstream 4192 true scaffold_10: 3506236-3510427 Eutrema salsugineum
Thhalv10017075m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_10: 3508428-3510427 Eutrema salsugineum
Thhalv10017075m.g 5.0kb upstream 5.0kb upstream 7192 true scaffold_10: 3501236-3508427 Eutrema salsugineum
Thhalv10017075m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_10: 3501236-3506235 Eutrema salsugineum
Thhalv10017075m.g 5.0kb downstream 5.0kb downstream 7192 true scaffold_10: 3506236-3513427 Eutrema salsugineum
Thhalv10017075m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_10: 3508428-3513427 Eutrema salsugineum
Thhalv10017075m.g 10.0kb upstream 10.0kb upstream 12192 true scaffold_10: 3496236-3508427 Eutrema salsugineum
Thhalv10017075m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_10: 3496236-3506235 Eutrema salsugineum
Thhalv10017075m.g 10.0kb downstream 10.0kb downstream 12192 true scaffold_10: 3506236-3518427 Eutrema salsugineum
Thhalv10017075m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_10: 3508428-3518427 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380316 5261 Brassicaceae View MSA
123838880 5264 Brassicales-Malvales View MSA
124350350 5266 SBM View MSA
124244340 5268 Malvidae View MSA
124071031 5270 Rosid View MSA
123753559 5271 Pentapetalae View MSA
122795540 5272 Eudicot View MSA
122047303 5273 Angiosperm View MSA
121351630 5274 Embryophyte View MSA
123428273 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain