Gene : Thhalv10017094m.g E. salsugineum v1.0
Defline:  (1 of 1) PTHR10003:SF34 - SUPEROXIDE DISMUTASE [CU-ZN] 2, CHLOROPLASTIC Genomic Order:  110
Name:  ? Thhalv10017094m.g Secondary Identifier:  ? PAC:20181258
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum DETOX1-PWY Eutrema salsugineum pathologic  
Esalsugineum DETOX1-PWY-1 Eutrema salsugineum pathologic  
Esalsugineum PWY-6854 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10017094m.g 0.5kb upstream 0.5kb upstream 4161 true scaffold_10: 3459655-3463815 Eutrema salsugineum
Thhalv10017094m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_10: 3459655-3460154 Eutrema salsugineum
Thhalv10017094m.g 0.5kb downstream 0.5kb downstream 4161 true scaffold_10: 3460155-3464315 Eutrema salsugineum
Thhalv10017094m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_10: 3463816-3464315 Eutrema salsugineum
Thhalv10017094m.g 1.0kb upstream 1.0kb upstream 4661 true scaffold_10: 3459155-3463815 Eutrema salsugineum
Thhalv10017094m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_10: 3459155-3460154 Eutrema salsugineum
Thhalv10017094m.g 1.0kb downstream 1.0kb downstream 4661 true scaffold_10: 3460155-3464815 Eutrema salsugineum
Thhalv10017094m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_10: 3463816-3464815 Eutrema salsugineum
Thhalv10017094m.g 2.0kb upstream 2.0kb upstream 5661 true scaffold_10: 3458155-3463815 Eutrema salsugineum
Thhalv10017094m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_10: 3458155-3460154 Eutrema salsugineum
Thhalv10017094m.g 2.0kb downstream 2.0kb downstream 5661 true scaffold_10: 3460155-3465815 Eutrema salsugineum
Thhalv10017094m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_10: 3463816-3465815 Eutrema salsugineum
Thhalv10017094m.g 5.0kb upstream 5.0kb upstream 8661 true scaffold_10: 3455155-3463815 Eutrema salsugineum
Thhalv10017094m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_10: 3455155-3460154 Eutrema salsugineum
Thhalv10017094m.g 5.0kb downstream 5.0kb downstream 8661 true scaffold_10: 3460155-3468815 Eutrema salsugineum
Thhalv10017094m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_10: 3463816-3468815 Eutrema salsugineum
Thhalv10017094m.g 10.0kb upstream 10.0kb upstream 13661 true scaffold_10: 3450155-3463815 Eutrema salsugineum
Thhalv10017094m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_10: 3450155-3460154 Eutrema salsugineum
Thhalv10017094m.g 10.0kb downstream 10.0kb downstream 13661 true scaffold_10: 3460155-3473815 Eutrema salsugineum
Thhalv10017094m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_10: 3463816-3473815 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375601 5261 Brassicaceae View MSA
123837251 5264 Brassicales-Malvales View MSA
124340795 5266 SBM View MSA
124253159 5268 Malvidae View MSA
124067425 5270 Rosid View MSA
123737273 5271 Pentapetalae View MSA
122788875 5272 Eudicot View MSA
122047736 5273 Angiosperm View MSA
121347419 5274 Embryophyte View MSA
123427939 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain