Gene : Thhalv10017142m.g E. salsugineum v1.0
Defline:  (1 of 3) 4.2.1.33 - 3-isopropylmalate dehydratase / Isopropylmalate isomerase Genomic Order:  1678
Name:  ? Thhalv10017142m.g Secondary Identifier:  ? PAC:20180503
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum BRANCHED-CHAIN-AA-SYN-PWY Eutrema salsugineum pathologic  
Esalsugineum LEUSYN-PWY Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10017142m.g 0.5kb upstream 0.5kb upstream 2199 true scaffold_10: 11890386-11892584 Eutrema salsugineum
Thhalv10017142m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_10: 11890386-11890885 Eutrema salsugineum
Thhalv10017142m.g 0.5kb downstream 0.5kb downstream 2199 true scaffold_10: 11890886-11893084 Eutrema salsugineum
Thhalv10017142m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_10: 11892585-11893084 Eutrema salsugineum
Thhalv10017142m.g 1.0kb upstream 1.0kb upstream 2699 true scaffold_10: 11889886-11892584 Eutrema salsugineum
Thhalv10017142m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_10: 11889886-11890885 Eutrema salsugineum
Thhalv10017142m.g 1.0kb downstream 1.0kb downstream 2699 true scaffold_10: 11890886-11893584 Eutrema salsugineum
Thhalv10017142m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_10: 11892585-11893584 Eutrema salsugineum
Thhalv10017142m.g 2.0kb upstream 2.0kb upstream 3699 true scaffold_10: 11888886-11892584 Eutrema salsugineum
Thhalv10017142m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_10: 11888886-11890885 Eutrema salsugineum
Thhalv10017142m.g 2.0kb downstream 2.0kb downstream 3699 true scaffold_10: 11890886-11894584 Eutrema salsugineum
Thhalv10017142m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_10: 11892585-11894584 Eutrema salsugineum
Thhalv10017142m.g 5.0kb upstream 5.0kb upstream 6699 true scaffold_10: 11885886-11892584 Eutrema salsugineum
Thhalv10017142m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_10: 11885886-11890885 Eutrema salsugineum
Thhalv10017142m.g 5.0kb downstream 5.0kb downstream 6699 true scaffold_10: 11890886-11897584 Eutrema salsugineum
Thhalv10017142m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_10: 11892585-11897584 Eutrema salsugineum
Thhalv10017142m.g 10.0kb upstream 10.0kb upstream 11699 true scaffold_10: 11880886-11892584 Eutrema salsugineum
Thhalv10017142m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_10: 11880886-11890885 Eutrema salsugineum
Thhalv10017142m.g 10.0kb downstream 10.0kb downstream 11699 true scaffold_10: 11890886-11902584 Eutrema salsugineum
Thhalv10017142m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_10: 11892585-11902584 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040980 5273 Angiosperm View MSA
122362047 5261 Brassicaceae View MSA
123839118 5264 Brassicales-Malvales View MSA
124338093 5266 SBM View MSA
124250878 5268 Malvidae View MSA
124068442 5270 Rosid View MSA
123736502 5271 Pentapetalae View MSA
122789957 5272 Eudicot View MSA
121345878 5274 Embryophyte View MSA
123423763 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain