Gene : Thhalv10017560m.g E. salsugineum v1.0

Defline:  (1 of 4) PTHR11106 - GANGLIOSIDE INDUCED DIFFERENTIATION ASSOCIATED PROTEIN 2-RELATED Genomic Order:  1441
Name:  ? Thhalv10017560m.g Secondary Identifier:  ? PAC:20180978

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10017560m.g 0.5kb upstream 0.5kb upstream 4106 true scaffold_10: 10870093-10874198 Eutrema salsugineum
Thhalv10017560m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_10: 10873699-10874198 Eutrema salsugineum
Thhalv10017560m.g 0.5kb downstream 0.5kb downstream 4106 true scaffold_10: 10869593-10873698 Eutrema salsugineum
Thhalv10017560m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_10: 10869593-10870092 Eutrema salsugineum
Thhalv10017560m.g 1.0kb upstream 1.0kb upstream 4606 true scaffold_10: 10870093-10874698 Eutrema salsugineum
Thhalv10017560m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_10: 10873699-10874698 Eutrema salsugineum
Thhalv10017560m.g 1.0kb downstream 1.0kb downstream 4606 true scaffold_10: 10869093-10873698 Eutrema salsugineum
Thhalv10017560m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_10: 10869093-10870092 Eutrema salsugineum
Thhalv10017560m.g 2.0kb upstream 2.0kb upstream 5606 true scaffold_10: 10870093-10875698 Eutrema salsugineum
Thhalv10017560m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_10: 10873699-10875698 Eutrema salsugineum
Thhalv10017560m.g 2.0kb downstream 2.0kb downstream 5606 true scaffold_10: 10868093-10873698 Eutrema salsugineum
Thhalv10017560m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_10: 10868093-10870092 Eutrema salsugineum
Thhalv10017560m.g 5.0kb upstream 5.0kb upstream 8606 true scaffold_10: 10870093-10878698 Eutrema salsugineum
Thhalv10017560m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_10: 10873699-10878698 Eutrema salsugineum
Thhalv10017560m.g 5.0kb downstream 5.0kb downstream 8606 true scaffold_10: 10865093-10873698 Eutrema salsugineum
Thhalv10017560m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_10: 10865093-10870092 Eutrema salsugineum
Thhalv10017560m.g 10.0kb upstream 10.0kb upstream 13606 true scaffold_10: 10870093-10883698 Eutrema salsugineum
Thhalv10017560m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_10: 10873699-10883698 Eutrema salsugineum
Thhalv10017560m.g 10.0kb downstream 10.0kb downstream 13606 true scaffold_10: 10860093-10873698 Eutrema salsugineum
Thhalv10017560m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_10: 10860093-10870092 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122356831 5261 Brassicaceae Singleton cluster - no MSA
123839273 5264 Brassicales-Malvales View MSA
124337612 5266 SBM View MSA
124242045 5268 Malvidae View MSA
124063406 5270 Rosid View MSA
123746303 5271 Pentapetalae View MSA
122790136 5272 Eudicot View MSA
122047973 5273 Angiosperm View MSA
121350961 5274 Embryophyte View MSA
123428110 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain