Gene : Thhalv10022926m.g E. salsugineum v1.0
Defline:  (1 of 9) PF05514 - HR-like lesion-inducing (HR_lesion) Genomic Order:  59
Name:  ? Thhalv10022926m.g Secondary Identifier:  ? PAC:20202188
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10022926m.g 0.5kb upstream 0.5kb upstream 2155 true scaffold_11: 342165-344319 Eutrema salsugineum
Thhalv10022926m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_11: 343820-344319 Eutrema salsugineum
Thhalv10022926m.g 0.5kb downstream 0.5kb downstream 2155 true scaffold_11: 341665-343819 Eutrema salsugineum
Thhalv10022926m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_11: 341665-342164 Eutrema salsugineum
Thhalv10022926m.g 1.0kb upstream 1.0kb upstream 2655 true scaffold_11: 342165-344819 Eutrema salsugineum
Thhalv10022926m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_11: 343820-344819 Eutrema salsugineum
Thhalv10022926m.g 1.0kb downstream 1.0kb downstream 2655 true scaffold_11: 341165-343819 Eutrema salsugineum
Thhalv10022926m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_11: 341165-342164 Eutrema salsugineum
Thhalv10022926m.g 2.0kb upstream 2.0kb upstream 3655 true scaffold_11: 342165-345819 Eutrema salsugineum
Thhalv10022926m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_11: 343820-345819 Eutrema salsugineum
Thhalv10022926m.g 2.0kb downstream 2.0kb downstream 3655 true scaffold_11: 340165-343819 Eutrema salsugineum
Thhalv10022926m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_11: 340165-342164 Eutrema salsugineum
Thhalv10022926m.g 5.0kb upstream 5.0kb upstream 6655 true scaffold_11: 342165-348819 Eutrema salsugineum
Thhalv10022926m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_11: 343820-348819 Eutrema salsugineum
Thhalv10022926m.g 5.0kb downstream 5.0kb downstream 6655 true scaffold_11: 337165-343819 Eutrema salsugineum
Thhalv10022926m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_11: 337165-342164 Eutrema salsugineum
Thhalv10022926m.g 10.0kb upstream 10.0kb upstream 11655 true scaffold_11: 342165-353819 Eutrema salsugineum
Thhalv10022926m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_11: 343820-353819 Eutrema salsugineum
Thhalv10022926m.g 10.0kb downstream 10.0kb downstream 11655 true scaffold_11: 332165-343819 Eutrema salsugineum
Thhalv10022926m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_11: 332165-342164 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122356940 5261 Brassicaceae Singleton cluster - no MSA
123795020 5264 Brassicales-Malvales Singleton cluster - no MSA
124292814 5266 SBM Singleton cluster - no MSA
124145536 5268 Malvidae Singleton cluster - no MSA
123871916 5270 Rosid Singleton cluster - no MSA
123456106 5271 Pentapetalae Singleton cluster - no MSA
122491534 5272 Eudicot Singleton cluster - no MSA
122052085 5273 Angiosperm View MSA
121312945 5274 Embryophyte View MSA
123350081 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain