Gene : Thhalv10023085m.g E. salsugineum v1.0
Defline:  (1 of 2) PTHR21136//PTHR21136:SF89 - SNARE PROTEINS Genomic Order:  380
Name:  ? Thhalv10023085m.g Secondary Identifier:  ? PAC:20201805
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10023085m.g 0.5kb upstream 0.5kb upstream 4770 true scaffold_11: 3774037-3778806 Eutrema salsugineum
Thhalv10023085m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_11: 3778307-3778806 Eutrema salsugineum
Thhalv10023085m.g 0.5kb downstream 0.5kb downstream 4770 true scaffold_11: 3773537-3778306 Eutrema salsugineum
Thhalv10023085m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_11: 3773537-3774036 Eutrema salsugineum
Thhalv10023085m.g 1.0kb upstream 1.0kb upstream 5270 true scaffold_11: 3774037-3779306 Eutrema salsugineum
Thhalv10023085m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_11: 3778307-3779306 Eutrema salsugineum
Thhalv10023085m.g 1.0kb downstream 1.0kb downstream 5270 true scaffold_11: 3773037-3778306 Eutrema salsugineum
Thhalv10023085m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_11: 3773037-3774036 Eutrema salsugineum
Thhalv10023085m.g 2.0kb upstream 2.0kb upstream 6270 true scaffold_11: 3774037-3780306 Eutrema salsugineum
Thhalv10023085m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_11: 3778307-3780306 Eutrema salsugineum
Thhalv10023085m.g 2.0kb downstream 2.0kb downstream 6270 true scaffold_11: 3772037-3778306 Eutrema salsugineum
Thhalv10023085m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_11: 3772037-3774036 Eutrema salsugineum
Thhalv10023085m.g 5.0kb upstream 5.0kb upstream 9270 true scaffold_11: 3774037-3783306 Eutrema salsugineum
Thhalv10023085m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_11: 3778307-3783306 Eutrema salsugineum
Thhalv10023085m.g 5.0kb downstream 5.0kb downstream 9270 true scaffold_11: 3769037-3778306 Eutrema salsugineum
Thhalv10023085m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_11: 3769037-3774036 Eutrema salsugineum
Thhalv10023085m.g 10.0kb upstream 10.0kb upstream 14270 true scaffold_11: 3774037-3788306 Eutrema salsugineum
Thhalv10023085m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_11: 3778307-3788306 Eutrema salsugineum
Thhalv10023085m.g 10.0kb downstream 10.0kb downstream 14270 true scaffold_11: 3764037-3778306 Eutrema salsugineum
Thhalv10023085m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_11: 3764037-3774036 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122356877 5261 Brassicaceae Singleton cluster - no MSA
123842109 5264 Brassicales-Malvales View MSA
124323248 5266 SBM View MSA
124254276 5268 Malvidae View MSA
124065843 5270 Rosid View MSA
123753791 5271 Pentapetalae View MSA
122788214 5272 Eudicot View MSA
122046474 5273 Angiosperm View MSA
121346313 5274 Embryophyte View MSA
123424515 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain