Gene : Thhalv10023011m.g E. salsugineum v1.0
Defline:  (1 of 1) PTHR22888 - CYTOCHROME C OXIDASE, SUBUNIT II Genomic Order:  430
Name:  ? Thhalv10023011m.g Secondary Identifier:  ? PAC:20202187
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum PWY-3781 Eutrema salsugineum pathologic  
Esalsugineum PWY-7279 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10023011m.g 0.5kb upstream 0.5kb upstream 2626 true scaffold_11: 4788189-4790814 Eutrema salsugineum
Thhalv10023011m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_11: 4790315-4790814 Eutrema salsugineum
Thhalv10023011m.g 0.5kb downstream 0.5kb downstream 2626 true scaffold_11: 4787689-4790314 Eutrema salsugineum
Thhalv10023011m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_11: 4787689-4788188 Eutrema salsugineum
Thhalv10023011m.g 1.0kb upstream 1.0kb upstream 3126 true scaffold_11: 4788189-4791314 Eutrema salsugineum
Thhalv10023011m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_11: 4790315-4791314 Eutrema salsugineum
Thhalv10023011m.g 1.0kb downstream 1.0kb downstream 3126 true scaffold_11: 4787189-4790314 Eutrema salsugineum
Thhalv10023011m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_11: 4787189-4788188 Eutrema salsugineum
Thhalv10023011m.g 2.0kb upstream 2.0kb upstream 4126 true scaffold_11: 4788189-4792314 Eutrema salsugineum
Thhalv10023011m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_11: 4790315-4792314 Eutrema salsugineum
Thhalv10023011m.g 2.0kb downstream 2.0kb downstream 4126 true scaffold_11: 4786189-4790314 Eutrema salsugineum
Thhalv10023011m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_11: 4786189-4788188 Eutrema salsugineum
Thhalv10023011m.g 5.0kb upstream 5.0kb upstream 7126 true scaffold_11: 4788189-4795314 Eutrema salsugineum
Thhalv10023011m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_11: 4790315-4795314 Eutrema salsugineum
Thhalv10023011m.g 5.0kb downstream 5.0kb downstream 7126 true scaffold_11: 4783189-4790314 Eutrema salsugineum
Thhalv10023011m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_11: 4783189-4788188 Eutrema salsugineum
Thhalv10023011m.g 10.0kb upstream 10.0kb upstream 12126 true scaffold_11: 4788189-4800314 Eutrema salsugineum
Thhalv10023011m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_11: 4790315-4800314 Eutrema salsugineum
Thhalv10023011m.g 10.0kb downstream 10.0kb downstream 12126 true scaffold_11: 4778189-4790314 Eutrema salsugineum
Thhalv10023011m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_11: 4778189-4788188 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027311 5273 Angiosperm View MSA
122379224 5261 Brassicaceae View MSA
123802149 5264 Brassicales-Malvales View MSA
124299366 5266 SBM View MSA
124252079 5268 Malvidae View MSA
124070743 5270 Rosid View MSA
123743967 5271 Pentapetalae View MSA
122795698 5272 Eudicot View MSA
121348321 5274 Embryophyte View MSA
123428300 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain