Gene : Thhalv10023015m.g E. salsugineum v1.0
Defline:  (1 of 439) PF13041 - PPR repeat family (PPR_2) Genomic Order:  195
Name:  ? Thhalv10023015m.g Secondary Identifier:  ? PAC:20202229
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10023015m.g 0.5kb upstream 0.5kb upstream 3887 true scaffold_11: 1417908-1421794 Eutrema salsugineum
Thhalv10023015m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_11: 1421295-1421794 Eutrema salsugineum
Thhalv10023015m.g 0.5kb downstream 0.5kb downstream 3887 true scaffold_11: 1417408-1421294 Eutrema salsugineum
Thhalv10023015m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_11: 1417408-1417907 Eutrema salsugineum
Thhalv10023015m.g 1.0kb upstream 1.0kb upstream 4387 true scaffold_11: 1417908-1422294 Eutrema salsugineum
Thhalv10023015m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_11: 1421295-1422294 Eutrema salsugineum
Thhalv10023015m.g 1.0kb downstream 1.0kb downstream 4387 true scaffold_11: 1416908-1421294 Eutrema salsugineum
Thhalv10023015m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_11: 1416908-1417907 Eutrema salsugineum
Thhalv10023015m.g 2.0kb upstream 2.0kb upstream 5387 true scaffold_11: 1417908-1423294 Eutrema salsugineum
Thhalv10023015m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_11: 1421295-1423294 Eutrema salsugineum
Thhalv10023015m.g 2.0kb downstream 2.0kb downstream 5387 true scaffold_11: 1415908-1421294 Eutrema salsugineum
Thhalv10023015m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_11: 1415908-1417907 Eutrema salsugineum
Thhalv10023015m.g 5.0kb upstream 5.0kb upstream 8387 true scaffold_11: 1417908-1426294 Eutrema salsugineum
Thhalv10023015m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_11: 1421295-1426294 Eutrema salsugineum
Thhalv10023015m.g 5.0kb downstream 5.0kb downstream 8387 true scaffold_11: 1412908-1421294 Eutrema salsugineum
Thhalv10023015m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_11: 1412908-1417907 Eutrema salsugineum
Thhalv10023015m.g 10.0kb upstream 10.0kb upstream 13387 true scaffold_11: 1417908-1431294 Eutrema salsugineum
Thhalv10023015m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_11: 1421295-1431294 Eutrema salsugineum
Thhalv10023015m.g 10.0kb downstream 10.0kb downstream 13387 true scaffold_11: 1407908-1421294 Eutrema salsugineum
Thhalv10023015m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_11: 1407908-1417907 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122356946 5261 Brassicaceae Singleton cluster - no MSA
123795026 5264 Brassicales-Malvales Singleton cluster - no MSA
124292819 5266 SBM Singleton cluster - no MSA
124145541 5268 Malvidae Singleton cluster - no MSA
123871921 5270 Rosid Singleton cluster - no MSA
123456110 5271 Pentapetalae Singleton cluster - no MSA
122491538 5272 Eudicot Singleton cluster - no MSA
122046332 5273 Angiosperm View MSA
121347677 5274 Embryophyte View MSA
123426917 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain