Gene : Thhalv10022684m.g E. salsugineum v1.0
Defline:  (1 of 3) 2.6.1.83 - LL-diaminopimelate aminotransferase / LL-diaminopimelate transaminase Genomic Order:  575
Name:  ? Thhalv10022684m.g Secondary Identifier:  ? PAC:20201853
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum PWY-5097 Eutrema salsugineum pathologic  
Esalsugineum PWY-724 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10022684m.g 0.5kb upstream 0.5kb upstream 3363 true scaffold_11: 8251280-8254642 Eutrema salsugineum
Thhalv10022684m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_11: 8251280-8251779 Eutrema salsugineum
Thhalv10022684m.g 0.5kb downstream 0.5kb downstream 3363 true scaffold_11: 8251780-8255142 Eutrema salsugineum
Thhalv10022684m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_11: 8254643-8255142 Eutrema salsugineum
Thhalv10022684m.g 1.0kb upstream 1.0kb upstream 3863 true scaffold_11: 8250780-8254642 Eutrema salsugineum
Thhalv10022684m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_11: 8250780-8251779 Eutrema salsugineum
Thhalv10022684m.g 1.0kb downstream 1.0kb downstream 3863 true scaffold_11: 8251780-8255642 Eutrema salsugineum
Thhalv10022684m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_11: 8254643-8255642 Eutrema salsugineum
Thhalv10022684m.g 2.0kb upstream 2.0kb upstream 4863 true scaffold_11: 8249780-8254642 Eutrema salsugineum
Thhalv10022684m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_11: 8249780-8251779 Eutrema salsugineum
Thhalv10022684m.g 2.0kb downstream 2.0kb downstream 4863 true scaffold_11: 8251780-8256642 Eutrema salsugineum
Thhalv10022684m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_11: 8254643-8256642 Eutrema salsugineum
Thhalv10022684m.g 5.0kb upstream 5.0kb upstream 7863 true scaffold_11: 8246780-8254642 Eutrema salsugineum
Thhalv10022684m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_11: 8246780-8251779 Eutrema salsugineum
Thhalv10022684m.g 5.0kb downstream 5.0kb downstream 7863 true scaffold_11: 8251780-8259642 Eutrema salsugineum
Thhalv10022684m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_11: 8254643-8259642 Eutrema salsugineum
Thhalv10022684m.g 10.0kb upstream 10.0kb upstream 12863 true scaffold_11: 8241780-8254642 Eutrema salsugineum
Thhalv10022684m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_11: 8241780-8251779 Eutrema salsugineum
Thhalv10022684m.g 10.0kb downstream 10.0kb downstream 12863 true scaffold_11: 8251780-8264642 Eutrema salsugineum
Thhalv10022684m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_11: 8254643-8264642 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381110 5261 Brassicaceae View MSA
123803060 5264 Brassicales-Malvales View MSA
124300197 5266 SBM View MSA
124252486 5268 Malvidae View MSA
124071170 5270 Rosid View MSA
123740014 5271 Pentapetalae View MSA
122788260 5272 Eudicot View MSA
122045161 5273 Angiosperm View MSA
121344343 5274 Embryophyte View MSA
123424947 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain