Gene : Thhalv10022738m.g E. salsugineum v1.0
Defline:  (1 of 1) PTHR20861:SF1 - HOMOSERINE KINASE Genomic Order:  270
Name:  ? Thhalv10022738m.g Secondary Identifier:  ? PAC:20201939
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum HOMOSER-THRESYN-PWY Eutrema salsugineum pathologic  
Esalsugineum PWY-3001 Eutrema salsugineum pathologic  
Esalsugineum PWY-702 Eutrema salsugineum pathologic  
Esalsugineum PWY-724 Eutrema salsugineum pathologic  
Esalsugineum THRESYN-PWY Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10022738m.g 0.5kb upstream 0.5kb upstream 2124 true scaffold_11: 2139441-2141564 Eutrema salsugineum
Thhalv10022738m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_11: 2141065-2141564 Eutrema salsugineum
Thhalv10022738m.g 0.5kb downstream 0.5kb downstream 2124 true scaffold_11: 2138941-2141064 Eutrema salsugineum
Thhalv10022738m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_11: 2138941-2139440 Eutrema salsugineum
Thhalv10022738m.g 1.0kb upstream 1.0kb upstream 2624 true scaffold_11: 2139441-2142064 Eutrema salsugineum
Thhalv10022738m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_11: 2141065-2142064 Eutrema salsugineum
Thhalv10022738m.g 1.0kb downstream 1.0kb downstream 2624 true scaffold_11: 2138441-2141064 Eutrema salsugineum
Thhalv10022738m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_11: 2138441-2139440 Eutrema salsugineum
Thhalv10022738m.g 2.0kb upstream 2.0kb upstream 3624 true scaffold_11: 2139441-2143064 Eutrema salsugineum
Thhalv10022738m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_11: 2141065-2143064 Eutrema salsugineum
Thhalv10022738m.g 2.0kb downstream 2.0kb downstream 3624 true scaffold_11: 2137441-2141064 Eutrema salsugineum
Thhalv10022738m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_11: 2137441-2139440 Eutrema salsugineum
Thhalv10022738m.g 5.0kb upstream 5.0kb upstream 6624 true scaffold_11: 2139441-2146064 Eutrema salsugineum
Thhalv10022738m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_11: 2141065-2146064 Eutrema salsugineum
Thhalv10022738m.g 5.0kb downstream 5.0kb downstream 6624 true scaffold_11: 2134441-2141064 Eutrema salsugineum
Thhalv10022738m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_11: 2134441-2139440 Eutrema salsugineum
Thhalv10022738m.g 10.0kb upstream 10.0kb upstream 11624 true scaffold_11: 2139441-2151064 Eutrema salsugineum
Thhalv10022738m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_11: 2141065-2151064 Eutrema salsugineum
Thhalv10022738m.g 10.0kb downstream 10.0kb downstream 11624 true scaffold_11: 2129441-2141064 Eutrema salsugineum
Thhalv10022738m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_11: 2129441-2139440 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361843 5261 Brassicaceae View MSA
123832058 5264 Brassicales-Malvales View MSA
124343868 5266 SBM View MSA
124249755 5268 Malvidae View MSA
124063769 5270 Rosid View MSA
123740380 5271 Pentapetalae View MSA
122792807 5272 Eudicot View MSA
122044756 5273 Angiosperm View MSA
121343956 5274 Embryophyte View MSA
123424273 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain