Gene : Thhalv10022750m.g E. salsugineum v1.0
Defline:  (1 of 8) 2.5.1.1//2.5.1.10//2.5.1.29 - Dimethylallyltranstransferase / Prenyltransferase // (2E,6E)-farnesyl diphosphate synthase / Geranyltranstransferase // Geranylgeranyl diphosphate synthase / Geranylgeranyl-PP synthetase Genomic Order:  84
Name:  ? Thhalv10022750m.g Secondary Identifier:  ? PAC:20202438
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum PWY-5120 Eutrema salsugineum pathologic  
Esalsugineum PWY-5122 Eutrema salsugineum pathologic  
Esalsugineum PWY-5123 Eutrema salsugineum pathologic  
Esalsugineum PWY-5910 Eutrema salsugineum pathologic  
Esalsugineum PWY-7709 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10022750m.g 0.5kb upstream 0.5kb upstream 1797 true scaffold_11: 581685-583481 Eutrema salsugineum
Thhalv10022750m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_11: 582982-583481 Eutrema salsugineum
Thhalv10022750m.g 0.5kb downstream 0.5kb downstream 1797 true scaffold_11: 581185-582981 Eutrema salsugineum
Thhalv10022750m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_11: 581185-581684 Eutrema salsugineum
Thhalv10022750m.g 1.0kb upstream 1.0kb upstream 2297 true scaffold_11: 581685-583981 Eutrema salsugineum
Thhalv10022750m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_11: 582982-583981 Eutrema salsugineum
Thhalv10022750m.g 1.0kb downstream 1.0kb downstream 2297 true scaffold_11: 580685-582981 Eutrema salsugineum
Thhalv10022750m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_11: 580685-581684 Eutrema salsugineum
Thhalv10022750m.g 2.0kb upstream 2.0kb upstream 3297 true scaffold_11: 581685-584981 Eutrema salsugineum
Thhalv10022750m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_11: 582982-584981 Eutrema salsugineum
Thhalv10022750m.g 2.0kb downstream 2.0kb downstream 3297 true scaffold_11: 579685-582981 Eutrema salsugineum
Thhalv10022750m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_11: 579685-581684 Eutrema salsugineum
Thhalv10022750m.g 5.0kb upstream 5.0kb upstream 6297 true scaffold_11: 581685-587981 Eutrema salsugineum
Thhalv10022750m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_11: 582982-587981 Eutrema salsugineum
Thhalv10022750m.g 5.0kb downstream 5.0kb downstream 6297 true scaffold_11: 576685-582981 Eutrema salsugineum
Thhalv10022750m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_11: 576685-581684 Eutrema salsugineum
Thhalv10022750m.g 10.0kb upstream 10.0kb upstream 11297 true scaffold_11: 581685-592981 Eutrema salsugineum
Thhalv10022750m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_11: 582982-592981 Eutrema salsugineum
Thhalv10022750m.g 10.0kb downstream 10.0kb downstream 11297 true scaffold_11: 571685-582981 Eutrema salsugineum
Thhalv10022750m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_11: 571685-581684 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378951 5261 Brassicaceae View MSA
123840424 5264 Brassicales-Malvales View MSA
124338716 5266 SBM View MSA
124237101 5268 Malvidae View MSA
124062615 5270 Rosid View MSA
123750127 5271 Pentapetalae View MSA
122794006 5272 Eudicot View MSA
122045672 5273 Angiosperm View MSA
121348382 5274 Embryophyte View MSA
123424390 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain