Gene : Thhalv10002124m.g E. salsugineum v1.0
Defline:  (1 of 3) PTHR34455:SF1 - EXPRESSED PROTEIN Genomic Order:  355
Name:  ? Thhalv10002124m.g Secondary Identifier:  ? PAC:20200417
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum PHOTOALL-PWY Eutrema salsugineum pathologic  
Esalsugineum PWY-101 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10002124m.g 0.5kb upstream 0.5kb upstream 1935 true scaffold_12: 10689831-10691765 Eutrema salsugineum
Thhalv10002124m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_12: 10689831-10690330 Eutrema salsugineum
Thhalv10002124m.g 0.5kb downstream 0.5kb downstream 1935 true scaffold_12: 10690331-10692265 Eutrema salsugineum
Thhalv10002124m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_12: 10691766-10692265 Eutrema salsugineum
Thhalv10002124m.g 1.0kb upstream 1.0kb upstream 2435 true scaffold_12: 10689331-10691765 Eutrema salsugineum
Thhalv10002124m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_12: 10689331-10690330 Eutrema salsugineum
Thhalv10002124m.g 1.0kb downstream 1.0kb downstream 2435 true scaffold_12: 10690331-10692765 Eutrema salsugineum
Thhalv10002124m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_12: 10691766-10692765 Eutrema salsugineum
Thhalv10002124m.g 2.0kb upstream 2.0kb upstream 3435 true scaffold_12: 10688331-10691765 Eutrema salsugineum
Thhalv10002124m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_12: 10688331-10690330 Eutrema salsugineum
Thhalv10002124m.g 2.0kb downstream 2.0kb downstream 3435 true scaffold_12: 10690331-10693765 Eutrema salsugineum
Thhalv10002124m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_12: 10691766-10693765 Eutrema salsugineum
Thhalv10002124m.g 5.0kb upstream 5.0kb upstream 6435 true scaffold_12: 10685331-10691765 Eutrema salsugineum
Thhalv10002124m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_12: 10685331-10690330 Eutrema salsugineum
Thhalv10002124m.g 5.0kb downstream 5.0kb downstream 6435 true scaffold_12: 10690331-10696765 Eutrema salsugineum
Thhalv10002124m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_12: 10691766-10696765 Eutrema salsugineum
Thhalv10002124m.g 10.0kb upstream 10.0kb upstream 11435 true scaffold_12: 10680331-10691765 Eutrema salsugineum
Thhalv10002124m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_12: 10680331-10690330 Eutrema salsugineum
Thhalv10002124m.g 10.0kb downstream 10.0kb downstream 11435 true scaffold_12: 10690331-10701765 Eutrema salsugineum
Thhalv10002124m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_12: 10691766-10701765 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370651 5261 Brassicaceae View MSA
123839864 5264 Brassicales-Malvales View MSA
124349923 5266 SBM View MSA
124245307 5268 Malvidae View MSA
124072175 5270 Rosid View MSA
123739685 5271 Pentapetalae View MSA
122793757 5272 Eudicot View MSA
122041544 5273 Angiosperm View MSA
121346235 5274 Embryophyte View MSA
123428099 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain