Gene : Thhalv10002184m.g E. salsugineum v1.0
Defline:  (1 of 3) PF03108//PF04434 - MuDR family transposase (DBD_Tnp_Mut) // SWIM zinc finger (SWIM) Genomic Order:  63
Name:  ? Thhalv10002184m.g Secondary Identifier:  ? PAC:20200685
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Ontology Annotation Displayer

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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10002184m.g 0.5kb upstream 0.5kb upstream 2638 true scaffold_12: 1313531-1316168 Eutrema salsugineum
Thhalv10002184m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_12: 1313531-1314030 Eutrema salsugineum
Thhalv10002184m.g 0.5kb downstream 0.5kb downstream 2638 true scaffold_12: 1314031-1316668 Eutrema salsugineum
Thhalv10002184m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_12: 1316169-1316668 Eutrema salsugineum
Thhalv10002184m.g 1.0kb upstream 1.0kb upstream 3138 true scaffold_12: 1313031-1316168 Eutrema salsugineum
Thhalv10002184m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_12: 1313031-1314030 Eutrema salsugineum
Thhalv10002184m.g 1.0kb downstream 1.0kb downstream 3138 true scaffold_12: 1314031-1317168 Eutrema salsugineum
Thhalv10002184m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_12: 1316169-1317168 Eutrema salsugineum
Thhalv10002184m.g 2.0kb upstream 2.0kb upstream 4138 true scaffold_12: 1312031-1316168 Eutrema salsugineum
Thhalv10002184m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_12: 1312031-1314030 Eutrema salsugineum
Thhalv10002184m.g 2.0kb downstream 2.0kb downstream 4138 true scaffold_12: 1314031-1318168 Eutrema salsugineum
Thhalv10002184m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_12: 1316169-1318168 Eutrema salsugineum
Thhalv10002184m.g 5.0kb upstream 5.0kb upstream 7138 true scaffold_12: 1309031-1316168 Eutrema salsugineum
Thhalv10002184m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_12: 1309031-1314030 Eutrema salsugineum
Thhalv10002184m.g 5.0kb downstream 5.0kb downstream 7138 true scaffold_12: 1314031-1321168 Eutrema salsugineum
Thhalv10002184m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_12: 1316169-1321168 Eutrema salsugineum
Thhalv10002184m.g 10.0kb upstream 10.0kb upstream 12138 true scaffold_12: 1304031-1316168 Eutrema salsugineum
Thhalv10002184m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_12: 1304031-1314030 Eutrema salsugineum
Thhalv10002184m.g 10.0kb downstream 10.0kb downstream 12138 true scaffold_12: 1314031-1326168 Eutrema salsugineum
Thhalv10002184m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_12: 1316169-1326168 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122357043 5261 Brassicaceae Singleton cluster - no MSA
123838876 5264 Brassicales-Malvales View MSA
124322511 5266 SBM View MSA
124169157 5268 Malvidae View MSA
123892279 5270 Rosid View MSA
123753345 5271 Pentapetalae View MSA
122797917 5272 Eudicot View MSA
122051679 5273 Angiosperm View MSA
121351767 5274 Embryophyte View MSA
123382313 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain