Gene : Thhalv10002197m.g E. salsugineum v1.0
Defline:  (1 of 93) KOG0417 - Ubiquitin-protein ligase Genomic Order:  200
Name:  ? Thhalv10002197m.g Secondary Identifier:  ? PAC:20200516
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum PWY-7511 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10002197m.g 0.5kb upstream 0.5kb upstream 944 true scaffold_12: 7800825-7801768 Eutrema salsugineum
Thhalv10002197m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_12: 7800825-7801324 Eutrema salsugineum
Thhalv10002197m.g 0.5kb downstream 0.5kb downstream 944 true scaffold_12: 7801325-7802268 Eutrema salsugineum
Thhalv10002197m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_12: 7801769-7802268 Eutrema salsugineum
Thhalv10002197m.g 1.0kb upstream 1.0kb upstream 1444 true scaffold_12: 7800325-7801768 Eutrema salsugineum
Thhalv10002197m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_12: 7800325-7801324 Eutrema salsugineum
Thhalv10002197m.g 1.0kb downstream 1.0kb downstream 1444 true scaffold_12: 7801325-7802768 Eutrema salsugineum
Thhalv10002197m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_12: 7801769-7802768 Eutrema salsugineum
Thhalv10002197m.g 2.0kb upstream 2.0kb upstream 2444 true scaffold_12: 7799325-7801768 Eutrema salsugineum
Thhalv10002197m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_12: 7799325-7801324 Eutrema salsugineum
Thhalv10002197m.g 2.0kb downstream 2.0kb downstream 2444 true scaffold_12: 7801325-7803768 Eutrema salsugineum
Thhalv10002197m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_12: 7801769-7803768 Eutrema salsugineum
Thhalv10002197m.g 5.0kb upstream 5.0kb upstream 5444 true scaffold_12: 7796325-7801768 Eutrema salsugineum
Thhalv10002197m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_12: 7796325-7801324 Eutrema salsugineum
Thhalv10002197m.g 5.0kb downstream 5.0kb downstream 5444 true scaffold_12: 7801325-7806768 Eutrema salsugineum
Thhalv10002197m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_12: 7801769-7806768 Eutrema salsugineum
Thhalv10002197m.g 10.0kb upstream 10.0kb upstream 10444 true scaffold_12: 7791325-7801768 Eutrema salsugineum
Thhalv10002197m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_12: 7791325-7801324 Eutrema salsugineum
Thhalv10002197m.g 10.0kb downstream 10.0kb downstream 10444 true scaffold_12: 7801325-7811768 Eutrema salsugineum
Thhalv10002197m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_12: 7801769-7811768 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360126 5261 Brassicaceae View MSA
123842040 5264 Brassicales-Malvales View MSA
124350709 5266 SBM View MSA
124253903 5268 Malvidae View MSA
124072408 5270 Rosid View MSA
123751143 5271 Pentapetalae View MSA
122796795 5272 Eudicot View MSA
122049643 5273 Angiosperm View MSA
121351650 5274 Embryophyte View MSA
123428086 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain