Gene : Thhalv10002304m.g E. salsugineum v1.0
Defline:  (1 of 16) PF01107 - Viral movement protein (MP) (MP) Genomic Order:  145
Name:  ? Thhalv10002304m.g Secondary Identifier:  ? PAC:20200354
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10002304m.g 0.5kb upstream 0.5kb upstream 3946 true scaffold_12: 4738651-4742596 Eutrema salsugineum
Thhalv10002304m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_12: 4742097-4742596 Eutrema salsugineum
Thhalv10002304m.g 0.5kb downstream 0.5kb downstream 3946 true scaffold_12: 4738151-4742096 Eutrema salsugineum
Thhalv10002304m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_12: 4738151-4738650 Eutrema salsugineum
Thhalv10002304m.g 1.0kb upstream 1.0kb upstream 4446 true scaffold_12: 4738651-4743096 Eutrema salsugineum
Thhalv10002304m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_12: 4742097-4743096 Eutrema salsugineum
Thhalv10002304m.g 1.0kb downstream 1.0kb downstream 4446 true scaffold_12: 4737651-4742096 Eutrema salsugineum
Thhalv10002304m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_12: 4737651-4738650 Eutrema salsugineum
Thhalv10002304m.g 2.0kb upstream 2.0kb upstream 5446 true scaffold_12: 4738651-4744096 Eutrema salsugineum
Thhalv10002304m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_12: 4742097-4744096 Eutrema salsugineum
Thhalv10002304m.g 2.0kb downstream 2.0kb downstream 5446 true scaffold_12: 4736651-4742096 Eutrema salsugineum
Thhalv10002304m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_12: 4736651-4738650 Eutrema salsugineum
Thhalv10002304m.g 5.0kb upstream 5.0kb upstream 8446 true scaffold_12: 4738651-4747096 Eutrema salsugineum
Thhalv10002304m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_12: 4742097-4747096 Eutrema salsugineum
Thhalv10002304m.g 5.0kb downstream 5.0kb downstream 8446 true scaffold_12: 4733651-4742096 Eutrema salsugineum
Thhalv10002304m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_12: 4733651-4738650 Eutrema salsugineum
Thhalv10002304m.g 10.0kb upstream 10.0kb upstream 13446 true scaffold_12: 4738651-4752096 Eutrema salsugineum
Thhalv10002304m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_12: 4742097-4752096 Eutrema salsugineum
Thhalv10002304m.g 10.0kb downstream 10.0kb downstream 13446 true scaffold_12: 4728651-4742096 Eutrema salsugineum
Thhalv10002304m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_12: 4728651-4738650 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121782046 5273 Angiosperm View MSA
122379348 5261 Brassicaceae View MSA
123838567 5264 Brassicales-Malvales View MSA
124322477 5266 SBM View MSA
124250153 5268 Malvidae View MSA
123952475 5270 Rosid View MSA
123751673 5271 Pentapetalae View MSA
122774131 5272 Eudicot View MSA
121053589 5274 Embryophyte View MSA
123093606 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain