Gene : Thhalv10001936m.g E. salsugineum v1.0
Defline:  (1 of 1) PTHR10000:SF8 - HAD SUPERFAMILY HYDROLASE-LIKE, TYPE 3 Genomic Order:  218
Name:  ? Thhalv10001936m.g Secondary Identifier:  ? PAC:20200357
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum GLUCOSE1PMETAB-PWY Eutrema salsugineum pathologic  
Esalsugineum PWY-3881 Eutrema salsugineum pathologic  
Esalsugineum PWY66-399 Eutrema salsugineum pathologic  
Esalsugineum PWY-882 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10001936m.g 0.5kb upstream 0.5kb upstream 4185 true scaffold_12: 8164614-8168798 Eutrema salsugineum
Thhalv10001936m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_12: 8164614-8165113 Eutrema salsugineum
Thhalv10001936m.g 0.5kb downstream 0.5kb downstream 4185 true scaffold_12: 8165114-8169298 Eutrema salsugineum
Thhalv10001936m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_12: 8168799-8169298 Eutrema salsugineum
Thhalv10001936m.g 1.0kb upstream 1.0kb upstream 4685 true scaffold_12: 8164114-8168798 Eutrema salsugineum
Thhalv10001936m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_12: 8164114-8165113 Eutrema salsugineum
Thhalv10001936m.g 1.0kb downstream 1.0kb downstream 4685 true scaffold_12: 8165114-8169798 Eutrema salsugineum
Thhalv10001936m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_12: 8168799-8169798 Eutrema salsugineum
Thhalv10001936m.g 2.0kb upstream 2.0kb upstream 5685 true scaffold_12: 8163114-8168798 Eutrema salsugineum
Thhalv10001936m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_12: 8163114-8165113 Eutrema salsugineum
Thhalv10001936m.g 2.0kb downstream 2.0kb downstream 5685 true scaffold_12: 8165114-8170798 Eutrema salsugineum
Thhalv10001936m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_12: 8168799-8170798 Eutrema salsugineum
Thhalv10001936m.g 5.0kb upstream 5.0kb upstream 8685 true scaffold_12: 8160114-8168798 Eutrema salsugineum
Thhalv10001936m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_12: 8160114-8165113 Eutrema salsugineum
Thhalv10001936m.g 5.0kb downstream 5.0kb downstream 8685 true scaffold_12: 8165114-8173798 Eutrema salsugineum
Thhalv10001936m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_12: 8168799-8173798 Eutrema salsugineum
Thhalv10001936m.g 10.0kb upstream 10.0kb upstream 13685 true scaffold_12: 8155114-8168798 Eutrema salsugineum
Thhalv10001936m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_12: 8155114-8165113 Eutrema salsugineum
Thhalv10001936m.g 10.0kb downstream 10.0kb downstream 13685 true scaffold_12: 8165114-8178798 Eutrema salsugineum
Thhalv10001936m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_12: 8168799-8178798 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372098 5261 Brassicaceae View MSA
123828074 5264 Brassicales-Malvales View MSA
124342192 5266 SBM View MSA
124242527 5268 Malvidae View MSA
124062911 5270 Rosid View MSA
123738949 5271 Pentapetalae View MSA
122790321 5272 Eudicot View MSA
122046350 5273 Angiosperm View MSA
121345493 5274 Embryophyte View MSA
123427682 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain