Gene : Thhalv10002004m.g E. salsugineum v1.0
Defline:  (1 of 1) 2.7.1.148 - 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase / CMK Genomic Order:  22
Name:  ? Thhalv10002004m.g Secondary Identifier:  ? PAC:20200469
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum PWY-7560 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10002004m.g 0.5kb upstream 0.5kb upstream 3935 true scaffold_12: 442290-446224 Eutrema salsugineum
Thhalv10002004m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_12: 442290-442789 Eutrema salsugineum
Thhalv10002004m.g 0.5kb downstream 0.5kb downstream 3935 true scaffold_12: 442790-446724 Eutrema salsugineum
Thhalv10002004m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_12: 446225-446724 Eutrema salsugineum
Thhalv10002004m.g 1.0kb upstream 1.0kb upstream 4435 true scaffold_12: 441790-446224 Eutrema salsugineum
Thhalv10002004m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_12: 441790-442789 Eutrema salsugineum
Thhalv10002004m.g 1.0kb downstream 1.0kb downstream 4435 true scaffold_12: 442790-447224 Eutrema salsugineum
Thhalv10002004m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_12: 446225-447224 Eutrema salsugineum
Thhalv10002004m.g 2.0kb upstream 2.0kb upstream 5435 true scaffold_12: 440790-446224 Eutrema salsugineum
Thhalv10002004m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_12: 440790-442789 Eutrema salsugineum
Thhalv10002004m.g 2.0kb downstream 2.0kb downstream 5435 true scaffold_12: 442790-448224 Eutrema salsugineum
Thhalv10002004m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_12: 446225-448224 Eutrema salsugineum
Thhalv10002004m.g 5.0kb upstream 5.0kb upstream 8435 true scaffold_12: 437790-446224 Eutrema salsugineum
Thhalv10002004m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_12: 437790-442789 Eutrema salsugineum
Thhalv10002004m.g 5.0kb downstream 5.0kb downstream 8435 true scaffold_12: 442790-451224 Eutrema salsugineum
Thhalv10002004m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_12: 446225-451224 Eutrema salsugineum
Thhalv10002004m.g 10.0kb upstream 10.0kb upstream 13435 true scaffold_12: 432790-446224 Eutrema salsugineum
Thhalv10002004m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_12: 432790-442789 Eutrema salsugineum
Thhalv10002004m.g 10.0kb downstream 10.0kb downstream 13435 true scaffold_12: 442790-456224 Eutrema salsugineum
Thhalv10002004m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_12: 446225-456224 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372695 5261 Brassicaceae View MSA
123831547 5264 Brassicales-Malvales View MSA
124340153 5266 SBM View MSA
124238115 5268 Malvidae View MSA
124062770 5270 Rosid View MSA
123737425 5271 Pentapetalae View MSA
122788330 5272 Eudicot View MSA
122044611 5273 Angiosperm View MSA
121345778 5274 Embryophyte View MSA
123424084 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain