Gene : Thhalv10001972m.g E. salsugineum v1.0
Defline:  (1 of 8) PTHR24015:SF644 - PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN Genomic Order:  379
Name:  ? Thhalv10001972m.g Secondary Identifier:  ? PAC:20200562
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10001972m.g 0.5kb upstream 0.5kb upstream 2089 true scaffold_12: 10803425-10805513 Eutrema salsugineum
Thhalv10001972m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_12: 10803425-10803924 Eutrema salsugineum
Thhalv10001972m.g 0.5kb downstream 0.5kb downstream 2089 true scaffold_12: 10803925-10806013 Eutrema salsugineum
Thhalv10001972m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_12: 10805514-10806013 Eutrema salsugineum
Thhalv10001972m.g 1.0kb upstream 1.0kb upstream 2589 true scaffold_12: 10802925-10805513 Eutrema salsugineum
Thhalv10001972m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_12: 10802925-10803924 Eutrema salsugineum
Thhalv10001972m.g 1.0kb downstream 1.0kb downstream 2589 true scaffold_12: 10803925-10806513 Eutrema salsugineum
Thhalv10001972m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_12: 10805514-10806513 Eutrema salsugineum
Thhalv10001972m.g 2.0kb upstream 2.0kb upstream 3589 true scaffold_12: 10801925-10805513 Eutrema salsugineum
Thhalv10001972m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_12: 10801925-10803924 Eutrema salsugineum
Thhalv10001972m.g 2.0kb downstream 2.0kb downstream 3589 true scaffold_12: 10803925-10807513 Eutrema salsugineum
Thhalv10001972m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_12: 10805514-10807513 Eutrema salsugineum
Thhalv10001972m.g 5.0kb upstream 5.0kb upstream 6589 true scaffold_12: 10798925-10805513 Eutrema salsugineum
Thhalv10001972m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_12: 10798925-10803924 Eutrema salsugineum
Thhalv10001972m.g 5.0kb downstream 5.0kb downstream 6589 true scaffold_12: 10803925-10810513 Eutrema salsugineum
Thhalv10001972m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_12: 10805514-10810513 Eutrema salsugineum
Thhalv10001972m.g 10.0kb upstream 10.0kb upstream 11589 true scaffold_12: 10793925-10805513 Eutrema salsugineum
Thhalv10001972m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_12: 10793925-10803924 Eutrema salsugineum
Thhalv10001972m.g 10.0kb downstream 10.0kb downstream 11589 true scaffold_12: 10803925-10815513 Eutrema salsugineum
Thhalv10001972m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_12: 10805514-10815513 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372445 5261 Brassicaceae View MSA
123835544 5264 Brassicales-Malvales View MSA
124349069 5266 SBM View MSA
124246781 5268 Malvidae View MSA
124071698 5270 Rosid View MSA
123743334 5271 Pentapetalae View MSA
122796848 5272 Eudicot View MSA
122049142 5273 Angiosperm View MSA
121311265 5274 Embryophyte View MSA
123348580 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain