Gene : Thhalv10019876m.g E. salsugineum v1.0
Defline:  (1 of 1) PTHR12741:SF22 - CALLOSE SYNTHASE 8-RELATED Genomic Order:  969
Name:  ? Thhalv10019876m.g Secondary Identifier:  ? PAC:20182693
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum PWY-6773 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10019876m.g 0.5kb upstream 0.5kb upstream 10524 true scaffold_13: 4483744-4494267 Eutrema salsugineum
Thhalv10019876m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_13: 4493768-4494267 Eutrema salsugineum
Thhalv10019876m.g 0.5kb downstream 0.5kb downstream 10524 true scaffold_13: 4483244-4493767 Eutrema salsugineum
Thhalv10019876m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_13: 4483244-4483743 Eutrema salsugineum
Thhalv10019876m.g 1.0kb upstream 1.0kb upstream 11024 true scaffold_13: 4483744-4494767 Eutrema salsugineum
Thhalv10019876m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_13: 4493768-4494767 Eutrema salsugineum
Thhalv10019876m.g 1.0kb downstream 1.0kb downstream 11024 true scaffold_13: 4482744-4493767 Eutrema salsugineum
Thhalv10019876m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_13: 4482744-4483743 Eutrema salsugineum
Thhalv10019876m.g 2.0kb upstream 2.0kb upstream 12024 true scaffold_13: 4483744-4495767 Eutrema salsugineum
Thhalv10019876m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_13: 4493768-4495767 Eutrema salsugineum
Thhalv10019876m.g 2.0kb downstream 2.0kb downstream 12024 true scaffold_13: 4481744-4493767 Eutrema salsugineum
Thhalv10019876m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_13: 4481744-4483743 Eutrema salsugineum
Thhalv10019876m.g 5.0kb upstream 5.0kb upstream 15024 true scaffold_13: 4483744-4498767 Eutrema salsugineum
Thhalv10019876m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_13: 4493768-4498767 Eutrema salsugineum
Thhalv10019876m.g 5.0kb downstream 5.0kb downstream 15024 true scaffold_13: 4478744-4493767 Eutrema salsugineum
Thhalv10019876m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_13: 4478744-4483743 Eutrema salsugineum
Thhalv10019876m.g 10.0kb upstream 10.0kb upstream 20024 true scaffold_13: 4483744-4503767 Eutrema salsugineum
Thhalv10019876m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_13: 4493768-4503767 Eutrema salsugineum
Thhalv10019876m.g 10.0kb downstream 10.0kb downstream 20024 true scaffold_13: 4473744-4493767 Eutrema salsugineum
Thhalv10019876m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_13: 4473744-4483743 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370856 5261 Brassicaceae View MSA
123828577 5264 Brassicales-Malvales View MSA
124351295 5266 SBM View MSA
124242789 5268 Malvidae View MSA
124068156 5270 Rosid View MSA
123740051 5271 Pentapetalae View MSA
122790921 5272 Eudicot View MSA
122050431 5273 Angiosperm View MSA
121349066 5274 Embryophyte View MSA
123428420 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain