Gene : Thhalv10020316m.g E. salsugineum v1.0
Defline:  (1 of 1) 4.3.1.19 - Threonine ammonia-lyase / Threonine dehydratase Genomic Order:  1431
Name:  ? Thhalv10020316m.g Secondary Identifier:  ? PAC:20182000
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum BRANCHED-CHAIN-AA-SYN-PWY Eutrema salsugineum pathologic  
Esalsugineum ILEUSYN-PWY Eutrema salsugineum pathologic  
Esalsugineum PWY-3001 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10020316m.g 0.5kb upstream 0.5kb upstream 3542 true scaffold_13: 6300971-6304512 Eutrema salsugineum
Thhalv10020316m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_13: 6300971-6301470 Eutrema salsugineum
Thhalv10020316m.g 0.5kb downstream 0.5kb downstream 3542 true scaffold_13: 6301471-6305012 Eutrema salsugineum
Thhalv10020316m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_13: 6304513-6305012 Eutrema salsugineum
Thhalv10020316m.g 1.0kb upstream 1.0kb upstream 4042 true scaffold_13: 6300471-6304512 Eutrema salsugineum
Thhalv10020316m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_13: 6300471-6301470 Eutrema salsugineum
Thhalv10020316m.g 1.0kb downstream 1.0kb downstream 4042 true scaffold_13: 6301471-6305512 Eutrema salsugineum
Thhalv10020316m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_13: 6304513-6305512 Eutrema salsugineum
Thhalv10020316m.g 2.0kb upstream 2.0kb upstream 5042 true scaffold_13: 6299471-6304512 Eutrema salsugineum
Thhalv10020316m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_13: 6299471-6301470 Eutrema salsugineum
Thhalv10020316m.g 2.0kb downstream 2.0kb downstream 5042 true scaffold_13: 6301471-6306512 Eutrema salsugineum
Thhalv10020316m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_13: 6304513-6306512 Eutrema salsugineum
Thhalv10020316m.g 5.0kb upstream 5.0kb upstream 8042 true scaffold_13: 6296471-6304512 Eutrema salsugineum
Thhalv10020316m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_13: 6296471-6301470 Eutrema salsugineum
Thhalv10020316m.g 5.0kb downstream 5.0kb downstream 8042 true scaffold_13: 6301471-6309512 Eutrema salsugineum
Thhalv10020316m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_13: 6304513-6309512 Eutrema salsugineum
Thhalv10020316m.g 10.0kb upstream 10.0kb upstream 13042 true scaffold_13: 6291471-6304512 Eutrema salsugineum
Thhalv10020316m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_13: 6291471-6301470 Eutrema salsugineum
Thhalv10020316m.g 10.0kb downstream 10.0kb downstream 13042 true scaffold_13: 6301471-6314512 Eutrema salsugineum
Thhalv10020316m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_13: 6304513-6314512 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040897 5273 Angiosperm View MSA
122377421 5261 Brassicaceae View MSA
123831169 5264 Brassicales-Malvales View MSA
124337828 5266 SBM View MSA
124240425 5268 Malvidae View MSA
124062087 5270 Rosid View MSA
123737037 5271 Pentapetalae View MSA
122787691 5272 Eudicot View MSA
121344792 5274 Embryophyte View MSA
123427671 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain