Gene : Thhalv10020363m.g E. salsugineum v1.0
Defline:  (1 of 1) PTHR10996:SF150 - D-3-PHOSPHOGLYCERATE DEHYDROGENASE Genomic Order:  459
Name:  ? Thhalv10020363m.g Secondary Identifier:  ? PAC:20182988
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum SER-GLYSYN-PWY Eutrema salsugineum pathologic  
Esalsugineum SERSYN-PWY Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10020363m.g 0.5kb upstream 0.5kb upstream 3160 true scaffold_13: 2487302-2490461 Eutrema salsugineum
Thhalv10020363m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_13: 2489962-2490461 Eutrema salsugineum
Thhalv10020363m.g 0.5kb downstream 0.5kb downstream 3160 true scaffold_13: 2486802-2489961 Eutrema salsugineum
Thhalv10020363m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_13: 2486802-2487301 Eutrema salsugineum
Thhalv10020363m.g 1.0kb upstream 1.0kb upstream 3660 true scaffold_13: 2487302-2490961 Eutrema salsugineum
Thhalv10020363m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_13: 2489962-2490961 Eutrema salsugineum
Thhalv10020363m.g 1.0kb downstream 1.0kb downstream 3660 true scaffold_13: 2486302-2489961 Eutrema salsugineum
Thhalv10020363m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_13: 2486302-2487301 Eutrema salsugineum
Thhalv10020363m.g 2.0kb upstream 2.0kb upstream 4660 true scaffold_13: 2487302-2491961 Eutrema salsugineum
Thhalv10020363m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_13: 2489962-2491961 Eutrema salsugineum
Thhalv10020363m.g 2.0kb downstream 2.0kb downstream 4660 true scaffold_13: 2485302-2489961 Eutrema salsugineum
Thhalv10020363m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_13: 2485302-2487301 Eutrema salsugineum
Thhalv10020363m.g 5.0kb upstream 5.0kb upstream 7660 true scaffold_13: 2487302-2494961 Eutrema salsugineum
Thhalv10020363m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_13: 2489962-2494961 Eutrema salsugineum
Thhalv10020363m.g 5.0kb downstream 5.0kb downstream 7660 true scaffold_13: 2482302-2489961 Eutrema salsugineum
Thhalv10020363m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_13: 2482302-2487301 Eutrema salsugineum
Thhalv10020363m.g 10.0kb upstream 10.0kb upstream 12660 true scaffold_13: 2487302-2499961 Eutrema salsugineum
Thhalv10020363m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_13: 2489962-2499961 Eutrema salsugineum
Thhalv10020363m.g 10.0kb downstream 10.0kb downstream 12660 true scaffold_13: 2477302-2489961 Eutrema salsugineum
Thhalv10020363m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_13: 2477302-2487301 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368613 5261 Brassicaceae View MSA
123799619 5264 Brassicales-Malvales View MSA
124297121 5266 SBM View MSA
124149091 5268 Malvidae View MSA
124071894 5270 Rosid View MSA
123750282 5271 Pentapetalae View MSA
122795023 5272 Eudicot View MSA
122044765 5273 Angiosperm View MSA
121347094 5274 Embryophyte View MSA
123427510 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain