Gene : Thhalv10020340m.g E. salsugineum v1.0
Defline:  (1 of 1) PTHR11817:SF14 - PLASTIDIAL PYRUVATE KINASE 1, CHLOROPLASTIC Genomic Order:  107
Name:  ? Thhalv10020340m.g Secondary Identifier:  ? PAC:20181699
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum ANAEROFRUCAT-PWY Eutrema salsugineum pathologic  
Esalsugineum ANAGLYCOLYSIS-PWY Eutrema salsugineum pathologic  
Esalsugineum PWY-1042 Eutrema salsugineum pathologic  
Esalsugineum PWY-5464 Eutrema salsugineum pathologic  
Esalsugineum PWY-5723 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10020340m.g 0.5kb upstream 0.5kb upstream 3468 true scaffold_13: 783191-786658 Eutrema salsugineum
Thhalv10020340m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_13: 786159-786658 Eutrema salsugineum
Thhalv10020340m.g 0.5kb downstream 0.5kb downstream 3468 true scaffold_13: 782691-786158 Eutrema salsugineum
Thhalv10020340m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_13: 782691-783190 Eutrema salsugineum
Thhalv10020340m.g 1.0kb upstream 1.0kb upstream 3968 true scaffold_13: 783191-787158 Eutrema salsugineum
Thhalv10020340m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_13: 786159-787158 Eutrema salsugineum
Thhalv10020340m.g 1.0kb downstream 1.0kb downstream 3968 true scaffold_13: 782191-786158 Eutrema salsugineum
Thhalv10020340m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_13: 782191-783190 Eutrema salsugineum
Thhalv10020340m.g 2.0kb upstream 2.0kb upstream 4968 true scaffold_13: 783191-788158 Eutrema salsugineum
Thhalv10020340m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_13: 786159-788158 Eutrema salsugineum
Thhalv10020340m.g 2.0kb downstream 2.0kb downstream 4968 true scaffold_13: 781191-786158 Eutrema salsugineum
Thhalv10020340m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_13: 781191-783190 Eutrema salsugineum
Thhalv10020340m.g 5.0kb upstream 5.0kb upstream 7968 true scaffold_13: 783191-791158 Eutrema salsugineum
Thhalv10020340m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_13: 786159-791158 Eutrema salsugineum
Thhalv10020340m.g 5.0kb downstream 5.0kb downstream 7968 true scaffold_13: 778191-786158 Eutrema salsugineum
Thhalv10020340m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_13: 778191-783190 Eutrema salsugineum
Thhalv10020340m.g 10.0kb upstream 10.0kb upstream 12968 true scaffold_13: 783191-796158 Eutrema salsugineum
Thhalv10020340m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_13: 786159-796158 Eutrema salsugineum
Thhalv10020340m.g 10.0kb downstream 10.0kb downstream 12968 true scaffold_13: 773191-786158 Eutrema salsugineum
Thhalv10020340m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_13: 773191-783190 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361118 5261 Brassicaceae View MSA
123830504 5264 Brassicales-Malvales View MSA
124343810 5266 SBM View MSA
124241704 5268 Malvidae View MSA
124069917 5270 Rosid View MSA
123742502 5271 Pentapetalae View MSA
122795154 5272 Eudicot View MSA
122047085 5273 Angiosperm View MSA
121351198 5274 Embryophyte View MSA
123423773 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain