Gene : Thhalv10020277m.g E. salsugineum v1.0
Defline:  (1 of 1) PTHR22594:SF36 - ASPARAGINE--TRNA LIGASE, CYTOPLASMIC 2 Genomic Order:  1635
Name:  ? Thhalv10020277m.g Secondary Identifier:  ? PAC:20181723
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum TRNA-CHARGING-PWY Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10020277m.g 0.5kb upstream 0.5kb upstream 3044 true scaffold_13: 7016378-7019421 Eutrema salsugineum
Thhalv10020277m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_13: 7016378-7016877 Eutrema salsugineum
Thhalv10020277m.g 0.5kb downstream 0.5kb downstream 3044 true scaffold_13: 7016878-7019921 Eutrema salsugineum
Thhalv10020277m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_13: 7019422-7019921 Eutrema salsugineum
Thhalv10020277m.g 1.0kb upstream 1.0kb upstream 3544 true scaffold_13: 7015878-7019421 Eutrema salsugineum
Thhalv10020277m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_13: 7015878-7016877 Eutrema salsugineum
Thhalv10020277m.g 1.0kb downstream 1.0kb downstream 3544 true scaffold_13: 7016878-7020421 Eutrema salsugineum
Thhalv10020277m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_13: 7019422-7020421 Eutrema salsugineum
Thhalv10020277m.g 2.0kb upstream 2.0kb upstream 4544 true scaffold_13: 7014878-7019421 Eutrema salsugineum
Thhalv10020277m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_13: 7014878-7016877 Eutrema salsugineum
Thhalv10020277m.g 2.0kb downstream 2.0kb downstream 4544 true scaffold_13: 7016878-7021421 Eutrema salsugineum
Thhalv10020277m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_13: 7019422-7021421 Eutrema salsugineum
Thhalv10020277m.g 5.0kb upstream 5.0kb upstream 7544 true scaffold_13: 7011878-7019421 Eutrema salsugineum
Thhalv10020277m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_13: 7011878-7016877 Eutrema salsugineum
Thhalv10020277m.g 5.0kb downstream 5.0kb downstream 7544 true scaffold_13: 7016878-7024421 Eutrema salsugineum
Thhalv10020277m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_13: 7019422-7024421 Eutrema salsugineum
Thhalv10020277m.g 10.0kb upstream 10.0kb upstream 12544 true scaffold_13: 7006878-7019421 Eutrema salsugineum
Thhalv10020277m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_13: 7006878-7016877 Eutrema salsugineum
Thhalv10020277m.g 10.0kb downstream 10.0kb downstream 12544 true scaffold_13: 7016878-7029421 Eutrema salsugineum
Thhalv10020277m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_13: 7019422-7029421 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371956 5261 Brassicaceae View MSA
123830836 5264 Brassicales-Malvales View MSA
124344086 5266 SBM View MSA
124250826 5268 Malvidae View MSA
124074798 5270 Rosid View MSA
123738885 5271 Pentapetalae View MSA
122790023 5272 Eudicot View MSA
122045893 5273 Angiosperm View MSA
121347200 5274 Embryophyte View MSA
123425101 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain