Gene : Thhalv10020825m.g E. salsugineum v1.0
Defline:  (1 of 1) 6.3.2.6 - Phosphoribosylaminoimidazolesuccinocarboxamide synthase / SAICARs Genomic Order:  297
Name:  ? Thhalv10020825m.g Secondary Identifier:  ? PAC:20181800
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum PWY-6124 Eutrema salsugineum pathologic  
Esalsugineum PWY-841 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10020825m.g 0.5kb upstream 0.5kb upstream 3420 true scaffold_13: 1765472-1768891 Eutrema salsugineum
Thhalv10020825m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_13: 1765472-1765971 Eutrema salsugineum
Thhalv10020825m.g 0.5kb downstream 0.5kb downstream 3420 true scaffold_13: 1765972-1769391 Eutrema salsugineum
Thhalv10020825m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_13: 1768892-1769391 Eutrema salsugineum
Thhalv10020825m.g 1.0kb upstream 1.0kb upstream 3920 true scaffold_13: 1764972-1768891 Eutrema salsugineum
Thhalv10020825m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_13: 1764972-1765971 Eutrema salsugineum
Thhalv10020825m.g 1.0kb downstream 1.0kb downstream 3920 true scaffold_13: 1765972-1769891 Eutrema salsugineum
Thhalv10020825m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_13: 1768892-1769891 Eutrema salsugineum
Thhalv10020825m.g 2.0kb upstream 2.0kb upstream 4920 true scaffold_13: 1763972-1768891 Eutrema salsugineum
Thhalv10020825m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_13: 1763972-1765971 Eutrema salsugineum
Thhalv10020825m.g 2.0kb downstream 2.0kb downstream 4920 true scaffold_13: 1765972-1770891 Eutrema salsugineum
Thhalv10020825m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_13: 1768892-1770891 Eutrema salsugineum
Thhalv10020825m.g 5.0kb upstream 5.0kb upstream 7920 true scaffold_13: 1760972-1768891 Eutrema salsugineum
Thhalv10020825m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_13: 1760972-1765971 Eutrema salsugineum
Thhalv10020825m.g 5.0kb downstream 5.0kb downstream 7920 true scaffold_13: 1765972-1773891 Eutrema salsugineum
Thhalv10020825m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_13: 1768892-1773891 Eutrema salsugineum
Thhalv10020825m.g 10.0kb upstream 10.0kb upstream 12920 true scaffold_13: 1755972-1768891 Eutrema salsugineum
Thhalv10020825m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_13: 1755972-1765971 Eutrema salsugineum
Thhalv10020825m.g 10.0kb downstream 10.0kb downstream 12920 true scaffold_13: 1765972-1778891 Eutrema salsugineum
Thhalv10020825m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_13: 1768892-1778891 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381368 5261 Brassicaceae View MSA
123829780 5264 Brassicales-Malvales View MSA
124339930 5266 SBM View MSA
124242739 5268 Malvidae View MSA
124065715 5270 Rosid View MSA
123739359 5271 Pentapetalae View MSA
122791298 5272 Eudicot View MSA
122044442 5273 Angiosperm View MSA
121346335 5274 Embryophyte View MSA
123424061 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain