Gene : Thhalv10020893m.g E. salsugineum v1.0
Defline:  (1 of 2) PTHR23416:SF56 - SERINE ACETYLTRANSFERASE 1, CHLOROPLASTIC-RELATED Genomic Order:  1126
Name:  ? Thhalv10020893m.g Secondary Identifier:  ? PAC:20181854
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum CYSTSYN-PWY Eutrema salsugineum pathologic  
Esalsugineum PWY-6936 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10020893m.g 0.5kb upstream 0.5kb upstream 2089 true scaffold_13: 5148987-5151075 Eutrema salsugineum
Thhalv10020893m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_13: 5148987-5149486 Eutrema salsugineum
Thhalv10020893m.g 0.5kb downstream 0.5kb downstream 2089 true scaffold_13: 5149487-5151575 Eutrema salsugineum
Thhalv10020893m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_13: 5151076-5151575 Eutrema salsugineum
Thhalv10020893m.g 1.0kb upstream 1.0kb upstream 2589 true scaffold_13: 5148487-5151075 Eutrema salsugineum
Thhalv10020893m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_13: 5148487-5149486 Eutrema salsugineum
Thhalv10020893m.g 1.0kb downstream 1.0kb downstream 2589 true scaffold_13: 5149487-5152075 Eutrema salsugineum
Thhalv10020893m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_13: 5151076-5152075 Eutrema salsugineum
Thhalv10020893m.g 2.0kb upstream 2.0kb upstream 3589 true scaffold_13: 5147487-5151075 Eutrema salsugineum
Thhalv10020893m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_13: 5147487-5149486 Eutrema salsugineum
Thhalv10020893m.g 2.0kb downstream 2.0kb downstream 3589 true scaffold_13: 5149487-5153075 Eutrema salsugineum
Thhalv10020893m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_13: 5151076-5153075 Eutrema salsugineum
Thhalv10020893m.g 5.0kb upstream 5.0kb upstream 6589 true scaffold_13: 5144487-5151075 Eutrema salsugineum
Thhalv10020893m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_13: 5144487-5149486 Eutrema salsugineum
Thhalv10020893m.g 5.0kb downstream 5.0kb downstream 6589 true scaffold_13: 5149487-5156075 Eutrema salsugineum
Thhalv10020893m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_13: 5151076-5156075 Eutrema salsugineum
Thhalv10020893m.g 10.0kb upstream 10.0kb upstream 11589 true scaffold_13: 5139487-5151075 Eutrema salsugineum
Thhalv10020893m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_13: 5139487-5149486 Eutrema salsugineum
Thhalv10020893m.g 10.0kb downstream 10.0kb downstream 11589 true scaffold_13: 5149487-5161075 Eutrema salsugineum
Thhalv10020893m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_13: 5151076-5161075 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364131 5261 Brassicaceae View MSA
123835018 5264 Brassicales-Malvales View MSA
124338786 5266 SBM View MSA
124238162 5268 Malvidae View MSA
124069334 5270 Rosid View MSA
123751427 5271 Pentapetalae View MSA
122788280 5272 Eudicot View MSA
122045055 5273 Angiosperm View MSA
121348374 5274 Embryophyte View MSA
123426625 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain