Gene : Thhalv10020624m.g E. salsugineum v1.0

Defline:  (1 of 1) PTHR22904:SF169 - RNA POLYMERASE II-ASSOCIATED PROTEIN 3 Genomic Order:  745
Name:  ? Thhalv10020624m.g Secondary Identifier:  ? PAC:20181469

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10020624m.g 0.5kb upstream 0.5kb upstream 2843 true scaffold_13: 3657042-3659884 Eutrema salsugineum
Thhalv10020624m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_13: 3659385-3659884 Eutrema salsugineum
Thhalv10020624m.g 0.5kb downstream 0.5kb downstream 2843 true scaffold_13: 3656542-3659384 Eutrema salsugineum
Thhalv10020624m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_13: 3656542-3657041 Eutrema salsugineum
Thhalv10020624m.g 1.0kb upstream 1.0kb upstream 3343 true scaffold_13: 3657042-3660384 Eutrema salsugineum
Thhalv10020624m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_13: 3659385-3660384 Eutrema salsugineum
Thhalv10020624m.g 1.0kb downstream 1.0kb downstream 3343 true scaffold_13: 3656042-3659384 Eutrema salsugineum
Thhalv10020624m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_13: 3656042-3657041 Eutrema salsugineum
Thhalv10020624m.g 2.0kb upstream 2.0kb upstream 4343 true scaffold_13: 3657042-3661384 Eutrema salsugineum
Thhalv10020624m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_13: 3659385-3661384 Eutrema salsugineum
Thhalv10020624m.g 2.0kb downstream 2.0kb downstream 4343 true scaffold_13: 3655042-3659384 Eutrema salsugineum
Thhalv10020624m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_13: 3655042-3657041 Eutrema salsugineum
Thhalv10020624m.g 5.0kb upstream 5.0kb upstream 7343 true scaffold_13: 3657042-3664384 Eutrema salsugineum
Thhalv10020624m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_13: 3659385-3664384 Eutrema salsugineum
Thhalv10020624m.g 5.0kb downstream 5.0kb downstream 7343 true scaffold_13: 3652042-3659384 Eutrema salsugineum
Thhalv10020624m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_13: 3652042-3657041 Eutrema salsugineum
Thhalv10020624m.g 10.0kb upstream 10.0kb upstream 12343 true scaffold_13: 3657042-3669384 Eutrema salsugineum
Thhalv10020624m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_13: 3659385-3669384 Eutrema salsugineum
Thhalv10020624m.g 10.0kb downstream 10.0kb downstream 12343 true scaffold_13: 3647042-3659384 Eutrema salsugineum
Thhalv10020624m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_13: 3647042-3657041 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026696 5273 Angiosperm View MSA
122378517 5261 Brassicaceae View MSA
123836853 5264 Brassicales-Malvales View MSA
124346842 5266 SBM View MSA
124246437 5268 Malvidae View MSA
124069433 5270 Rosid View MSA
123746924 5271 Pentapetalae View MSA
122794448 5272 Eudicot View MSA
123429169 5275 Viridiplantae View MSA
121348213 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain