Gene : Thhalv10021215m.g E. salsugineum v1.0

Defline:  (1 of 1) PTHR19332 - PEROXISOMAL MEMBRANE PROTEIN PEX13 Genomic Order:  1622
Name:  ? Thhalv10021215m.g Secondary Identifier:  ? PAC:20182102

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10021215m.g 0.5kb upstream 0.5kb upstream 3390 true scaffold_13: 6983066-6986455 Eutrema salsugineum
Thhalv10021215m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_13: 6983066-6983565 Eutrema salsugineum
Thhalv10021215m.g 0.5kb downstream 0.5kb downstream 3390 true scaffold_13: 6983566-6986955 Eutrema salsugineum
Thhalv10021215m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_13: 6986456-6986955 Eutrema salsugineum
Thhalv10021215m.g 1.0kb upstream 1.0kb upstream 3890 true scaffold_13: 6982566-6986455 Eutrema salsugineum
Thhalv10021215m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_13: 6982566-6983565 Eutrema salsugineum
Thhalv10021215m.g 1.0kb downstream 1.0kb downstream 3890 true scaffold_13: 6983566-6987455 Eutrema salsugineum
Thhalv10021215m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_13: 6986456-6987455 Eutrema salsugineum
Thhalv10021215m.g 2.0kb upstream 2.0kb upstream 4890 true scaffold_13: 6981566-6986455 Eutrema salsugineum
Thhalv10021215m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_13: 6981566-6983565 Eutrema salsugineum
Thhalv10021215m.g 2.0kb downstream 2.0kb downstream 4890 true scaffold_13: 6983566-6988455 Eutrema salsugineum
Thhalv10021215m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_13: 6986456-6988455 Eutrema salsugineum
Thhalv10021215m.g 5.0kb upstream 5.0kb upstream 7890 true scaffold_13: 6978566-6986455 Eutrema salsugineum
Thhalv10021215m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_13: 6978566-6983565 Eutrema salsugineum
Thhalv10021215m.g 5.0kb downstream 5.0kb downstream 7890 true scaffold_13: 6983566-6991455 Eutrema salsugineum
Thhalv10021215m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_13: 6986456-6991455 Eutrema salsugineum
Thhalv10021215m.g 10.0kb upstream 10.0kb upstream 12890 true scaffold_13: 6973566-6986455 Eutrema salsugineum
Thhalv10021215m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_13: 6973566-6983565 Eutrema salsugineum
Thhalv10021215m.g 10.0kb downstream 10.0kb downstream 12890 true scaffold_13: 6983566-6996455 Eutrema salsugineum
Thhalv10021215m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_13: 6986456-6996455 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369250 5261 Brassicaceae View MSA
123831189 5264 Brassicales-Malvales View MSA
124340847 5266 SBM View MSA
124250621 5268 Malvidae View MSA
124050988 5270 Rosid View MSA
123738456 5271 Pentapetalae View MSA
122790509 5272 Eudicot View MSA
122050338 5273 Angiosperm View MSA
121346034 5274 Embryophyte View MSA
123428810 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain