Gene : Thhalv10021813m.g E. salsugineum v1.0
Defline:  (1 of 2) PTHR34940:SF1 - PHOTOSYSTEM II 5 KDA PROTEIN, CHLOROPLASTIC Genomic Order:  302
Name:  ? Thhalv10021813m.g Secondary Identifier:  ? PAC:20181896
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10021813m.g 0.5kb upstream 0.5kb upstream 1133 true scaffold_13: 1792258-1793390 Eutrema salsugineum
Thhalv10021813m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_13: 1792258-1792757 Eutrema salsugineum
Thhalv10021813m.g 0.5kb downstream 0.5kb downstream 1133 true scaffold_13: 1792758-1793890 Eutrema salsugineum
Thhalv10021813m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_13: 1793391-1793890 Eutrema salsugineum
Thhalv10021813m.g 1.0kb upstream 1.0kb upstream 1633 true scaffold_13: 1791758-1793390 Eutrema salsugineum
Thhalv10021813m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_13: 1791758-1792757 Eutrema salsugineum
Thhalv10021813m.g 1.0kb downstream 1.0kb downstream 1633 true scaffold_13: 1792758-1794390 Eutrema salsugineum
Thhalv10021813m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_13: 1793391-1794390 Eutrema salsugineum
Thhalv10021813m.g 2.0kb upstream 2.0kb upstream 2633 true scaffold_13: 1790758-1793390 Eutrema salsugineum
Thhalv10021813m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_13: 1790758-1792757 Eutrema salsugineum
Thhalv10021813m.g 2.0kb downstream 2.0kb downstream 2633 true scaffold_13: 1792758-1795390 Eutrema salsugineum
Thhalv10021813m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_13: 1793391-1795390 Eutrema salsugineum
Thhalv10021813m.g 5.0kb upstream 5.0kb upstream 5633 true scaffold_13: 1787758-1793390 Eutrema salsugineum
Thhalv10021813m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_13: 1787758-1792757 Eutrema salsugineum
Thhalv10021813m.g 5.0kb downstream 5.0kb downstream 5633 true scaffold_13: 1792758-1798390 Eutrema salsugineum
Thhalv10021813m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_13: 1793391-1798390 Eutrema salsugineum
Thhalv10021813m.g 10.0kb upstream 10.0kb upstream 10633 true scaffold_13: 1782758-1793390 Eutrema salsugineum
Thhalv10021813m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_13: 1782758-1792757 Eutrema salsugineum
Thhalv10021813m.g 10.0kb downstream 10.0kb downstream 10633 true scaffold_13: 1792758-1803390 Eutrema salsugineum
Thhalv10021813m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_13: 1793391-1803390 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381402 5261 Brassicaceae View MSA
123840325 5264 Brassicales-Malvales View MSA
124349006 5266 SBM View MSA
124249733 5268 Malvidae View MSA
124063108 5270 Rosid View MSA
123738637 5271 Pentapetalae View MSA
122793683 5272 Eudicot View MSA
122046745 5273 Angiosperm View MSA
121349271 5274 Embryophyte View MSA
123427633 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain