Gene : Thhalv10028131m.g E. salsugineum v1.0

Defline:  (1 of 2) PTHR31852:SF1 - LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN-RELATED Genomic Order:  662
Name:  ? Thhalv10028131m.g Secondary Identifier:  ? PAC:20189392

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10028131m.g 0.5kb upstream 0.5kb upstream 1365 true scaffold_14: 8532161-8533525 Eutrema salsugineum
Thhalv10028131m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_14: 8532161-8532660 Eutrema salsugineum
Thhalv10028131m.g 0.5kb downstream 0.5kb downstream 1365 true scaffold_14: 8532661-8534025 Eutrema salsugineum
Thhalv10028131m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_14: 8533526-8534025 Eutrema salsugineum
Thhalv10028131m.g 1.0kb upstream 1.0kb upstream 1865 true scaffold_14: 8531661-8533525 Eutrema salsugineum
Thhalv10028131m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_14: 8531661-8532660 Eutrema salsugineum
Thhalv10028131m.g 1.0kb downstream 1.0kb downstream 1865 true scaffold_14: 8532661-8534525 Eutrema salsugineum
Thhalv10028131m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_14: 8533526-8534525 Eutrema salsugineum
Thhalv10028131m.g 2.0kb upstream 2.0kb upstream 2865 true scaffold_14: 8530661-8533525 Eutrema salsugineum
Thhalv10028131m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_14: 8530661-8532660 Eutrema salsugineum
Thhalv10028131m.g 2.0kb downstream 2.0kb downstream 2865 true scaffold_14: 8532661-8535525 Eutrema salsugineum
Thhalv10028131m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_14: 8533526-8535525 Eutrema salsugineum
Thhalv10028131m.g 5.0kb upstream 5.0kb upstream 5865 true scaffold_14: 8527661-8533525 Eutrema salsugineum
Thhalv10028131m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_14: 8527661-8532660 Eutrema salsugineum
Thhalv10028131m.g 5.0kb downstream 5.0kb downstream 5865 true scaffold_14: 8532661-8538525 Eutrema salsugineum
Thhalv10028131m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_14: 8533526-8538525 Eutrema salsugineum
Thhalv10028131m.g 10.0kb upstream 10.0kb upstream 10865 true scaffold_14: 8522661-8533525 Eutrema salsugineum
Thhalv10028131m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_14: 8522661-8532660 Eutrema salsugineum
Thhalv10028131m.g 10.0kb downstream 10.0kb downstream 10865 true scaffold_14: 8532661-8543525 Eutrema salsugineum
Thhalv10028131m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_14: 8533526-8543525 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362433 5261 Brassicaceae View MSA
123839937 5264 Brassicales-Malvales View MSA
124343640 5266 SBM View MSA
124243189 5268 Malvidae View MSA
124063776 5270 Rosid View MSA
123751487 5271 Pentapetalae View MSA
122787858 5272 Eudicot View MSA
122044505 5273 Angiosperm View MSA
121351108 5274 Embryophyte View MSA
123382008 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain