Gene : Thhalv10028321m.g E. salsugineum v1.0
Defline:  (1 of 6) 6.5.1.1 - DNA ligase (ATP) / Sealase Genomic Order:  439
Name:  ? Thhalv10028321m.g Secondary Identifier:  ? PAC:20190016
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10028321m.g 0.5kb upstream 0.5kb upstream 4073 true scaffold_14: 5244308-5248380 Eutrema salsugineum
Thhalv10028321m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_14: 5247881-5248380 Eutrema salsugineum
Thhalv10028321m.g 0.5kb downstream 0.5kb downstream 4073 true scaffold_14: 5243808-5247880 Eutrema salsugineum
Thhalv10028321m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_14: 5243808-5244307 Eutrema salsugineum
Thhalv10028321m.g 1.0kb upstream 1.0kb upstream 4573 true scaffold_14: 5244308-5248880 Eutrema salsugineum
Thhalv10028321m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_14: 5247881-5248880 Eutrema salsugineum
Thhalv10028321m.g 1.0kb downstream 1.0kb downstream 4573 true scaffold_14: 5243308-5247880 Eutrema salsugineum
Thhalv10028321m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_14: 5243308-5244307 Eutrema salsugineum
Thhalv10028321m.g 2.0kb upstream 2.0kb upstream 5573 true scaffold_14: 5244308-5249880 Eutrema salsugineum
Thhalv10028321m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_14: 5247881-5249880 Eutrema salsugineum
Thhalv10028321m.g 2.0kb downstream 2.0kb downstream 5573 true scaffold_14: 5242308-5247880 Eutrema salsugineum
Thhalv10028321m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_14: 5242308-5244307 Eutrema salsugineum
Thhalv10028321m.g 5.0kb upstream 5.0kb upstream 8573 true scaffold_14: 5244308-5252880 Eutrema salsugineum
Thhalv10028321m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_14: 5247881-5252880 Eutrema salsugineum
Thhalv10028321m.g 5.0kb downstream 5.0kb downstream 8573 true scaffold_14: 5239308-5247880 Eutrema salsugineum
Thhalv10028321m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_14: 5239308-5244307 Eutrema salsugineum
Thhalv10028321m.g 10.0kb upstream 10.0kb upstream 13573 true scaffold_14: 5244308-5257880 Eutrema salsugineum
Thhalv10028321m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_14: 5247881-5257880 Eutrema salsugineum
Thhalv10028321m.g 10.0kb downstream 10.0kb downstream 13573 true scaffold_14: 5234308-5247880 Eutrema salsugineum
Thhalv10028321m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_14: 5234308-5244307 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121508581 5273 Angiosperm Singleton cluster - no MSA
122357377 5261 Brassicaceae Singleton cluster - no MSA
123795431 5264 Brassicales-Malvales Singleton cluster - no MSA
124293215 5266 SBM Singleton cluster - no MSA
124145894 5268 Malvidae Singleton cluster - no MSA
123872236 5270 Rosid Singleton cluster - no MSA
123456391 5271 Pentapetalae Singleton cluster - no MSA
122491815 5272 Eudicot Singleton cluster - no MSA
120781714 5274 Embryophyte Singleton cluster - no MSA
122823769 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain