Gene : Thhalv10027879m.g E. salsugineum v1.0
Defline:  (1 of 2) PTHR11921:SF29 - SUCCINATE DEHYDROGENASE [UBIQUINONE] IRON-SULFUR SUBUNIT, MITOCHONDRIAL Genomic Order:  180
Name:  ? Thhalv10027879m.g Secondary Identifier:  ? PAC:20189543
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum PWY-3781 Eutrema salsugineum pathologic  
Esalsugineum PWY-4302 Eutrema salsugineum pathologic  
Esalsugineum PWY-5464 Eutrema salsugineum pathologic  
Esalsugineum PWY-561 Eutrema salsugineum pathologic  
Esalsugineum PWY-5690 Eutrema salsugineum pathologic  
Esalsugineum PWY-7279 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10027879m.g 0.5kb upstream 0.5kb upstream 2253 true scaffold_14: 3167950-3170202 Eutrema salsugineum
Thhalv10027879m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_14: 3169703-3170202 Eutrema salsugineum
Thhalv10027879m.g 0.5kb downstream 0.5kb downstream 2253 true scaffold_14: 3167450-3169702 Eutrema salsugineum
Thhalv10027879m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_14: 3167450-3167949 Eutrema salsugineum
Thhalv10027879m.g 1.0kb upstream 1.0kb upstream 2753 true scaffold_14: 3167950-3170702 Eutrema salsugineum
Thhalv10027879m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_14: 3169703-3170702 Eutrema salsugineum
Thhalv10027879m.g 1.0kb downstream 1.0kb downstream 2753 true scaffold_14: 3166950-3169702 Eutrema salsugineum
Thhalv10027879m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_14: 3166950-3167949 Eutrema salsugineum
Thhalv10027879m.g 2.0kb upstream 2.0kb upstream 3753 true scaffold_14: 3167950-3171702 Eutrema salsugineum
Thhalv10027879m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_14: 3169703-3171702 Eutrema salsugineum
Thhalv10027879m.g 2.0kb downstream 2.0kb downstream 3753 true scaffold_14: 3165950-3169702 Eutrema salsugineum
Thhalv10027879m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_14: 3165950-3167949 Eutrema salsugineum
Thhalv10027879m.g 5.0kb upstream 5.0kb upstream 6753 true scaffold_14: 3167950-3174702 Eutrema salsugineum
Thhalv10027879m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_14: 3169703-3174702 Eutrema salsugineum
Thhalv10027879m.g 5.0kb downstream 5.0kb downstream 6753 true scaffold_14: 3162950-3169702 Eutrema salsugineum
Thhalv10027879m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_14: 3162950-3167949 Eutrema salsugineum
Thhalv10027879m.g 10.0kb upstream 10.0kb upstream 11753 true scaffold_14: 3167950-3179702 Eutrema salsugineum
Thhalv10027879m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_14: 3169703-3179702 Eutrema salsugineum
Thhalv10027879m.g 10.0kb downstream 10.0kb downstream 11753 true scaffold_14: 3157950-3169702 Eutrema salsugineum
Thhalv10027879m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_14: 3157950-3167949 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377104 5261 Brassicaceae View MSA
123827832 5264 Brassicales-Malvales View MSA
124342277 5266 SBM View MSA
124240423 5268 Malvidae View MSA
124072619 5270 Rosid View MSA
123748072 5271 Pentapetalae View MSA
122787884 5272 Eudicot View MSA
122049105 5273 Angiosperm View MSA
121351479 5274 Embryophyte View MSA
123424532 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain