Gene : Thhalv10027965m.g E. salsugineum v1.0
Defline:  (1 of 3) PTHR11035 - PTPLA DOMAIN PROTEIN Genomic Order:  456
Name:  ? Thhalv10027965m.g Secondary Identifier:  ? PAC:20189646
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Sequence Feature Displayer

Ontology Annotation Displayer

7 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum PWY-5080 Eutrema salsugineum pathologic  
Esalsugineum PWY-6433 Eutrema salsugineum pathologic  
Esalsugineum PWY-6598 Eutrema salsugineum pathologic  
Esalsugineum PWY-7036 Eutrema salsugineum pathologic  
Esalsugineum PWY-7601 Eutrema salsugineum pathologic  
Esalsugineum PWY-7606 Eutrema salsugineum pathologic  
Esalsugineum PWY-7619 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10027965m.g 0.5kb upstream 0.5kb upstream 2013 true scaffold_14: 5443857-5445869 Eutrema salsugineum
Thhalv10027965m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_14: 5445370-5445869 Eutrema salsugineum
Thhalv10027965m.g 0.5kb downstream 0.5kb downstream 2013 true scaffold_14: 5443357-5445369 Eutrema salsugineum
Thhalv10027965m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_14: 5443357-5443856 Eutrema salsugineum
Thhalv10027965m.g 1.0kb upstream 1.0kb upstream 2513 true scaffold_14: 5443857-5446369 Eutrema salsugineum
Thhalv10027965m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_14: 5445370-5446369 Eutrema salsugineum
Thhalv10027965m.g 1.0kb downstream 1.0kb downstream 2513 true scaffold_14: 5442857-5445369 Eutrema salsugineum
Thhalv10027965m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_14: 5442857-5443856 Eutrema salsugineum
Thhalv10027965m.g 2.0kb upstream 2.0kb upstream 3513 true scaffold_14: 5443857-5447369 Eutrema salsugineum
Thhalv10027965m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_14: 5445370-5447369 Eutrema salsugineum
Thhalv10027965m.g 2.0kb downstream 2.0kb downstream 3513 true scaffold_14: 5441857-5445369 Eutrema salsugineum
Thhalv10027965m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_14: 5441857-5443856 Eutrema salsugineum
Thhalv10027965m.g 5.0kb upstream 5.0kb upstream 6513 true scaffold_14: 5443857-5450369 Eutrema salsugineum
Thhalv10027965m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_14: 5445370-5450369 Eutrema salsugineum
Thhalv10027965m.g 5.0kb downstream 5.0kb downstream 6513 true scaffold_14: 5438857-5445369 Eutrema salsugineum
Thhalv10027965m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_14: 5438857-5443856 Eutrema salsugineum
Thhalv10027965m.g 10.0kb upstream 10.0kb upstream 11513 true scaffold_14: 5443857-5455369 Eutrema salsugineum
Thhalv10027965m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_14: 5445370-5455369 Eutrema salsugineum
Thhalv10027965m.g 10.0kb downstream 10.0kb downstream 11513 true scaffold_14: 5433857-5445369 Eutrema salsugineum
Thhalv10027965m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_14: 5433857-5443856 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367081 5261 Brassicaceae View MSA
123836753 5264 Brassicales-Malvales View MSA
124349665 5266 SBM View MSA
124243174 5268 Malvidae View MSA
124067090 5270 Rosid View MSA
123747996 5271 Pentapetalae View MSA
122792245 5272 Eudicot View MSA
122043901 5273 Angiosperm View MSA
121347400 5274 Embryophyte View MSA
123425989 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain