Gene : Thhalv10027903m.g E. salsugineum v1.0
Defline:  (1 of 23) PTHR10791 - RAG1-ACTIVATING PROTEIN 1 Genomic Order:  241
Name:  ? Thhalv10027903m.g Secondary Identifier:  ? PAC:20189509
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10027903m.g 0.5kb upstream 0.5kb upstream 2297 true scaffold_14: 3599389-3601685 Eutrema salsugineum
Thhalv10027903m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_14: 3601186-3601685 Eutrema salsugineum
Thhalv10027903m.g 0.5kb downstream 0.5kb downstream 2297 true scaffold_14: 3598889-3601185 Eutrema salsugineum
Thhalv10027903m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_14: 3598889-3599388 Eutrema salsugineum
Thhalv10027903m.g 1.0kb upstream 1.0kb upstream 2797 true scaffold_14: 3599389-3602185 Eutrema salsugineum
Thhalv10027903m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_14: 3601186-3602185 Eutrema salsugineum
Thhalv10027903m.g 1.0kb downstream 1.0kb downstream 2797 true scaffold_14: 3598389-3601185 Eutrema salsugineum
Thhalv10027903m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_14: 3598389-3599388 Eutrema salsugineum
Thhalv10027903m.g 2.0kb upstream 2.0kb upstream 3797 true scaffold_14: 3599389-3603185 Eutrema salsugineum
Thhalv10027903m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_14: 3601186-3603185 Eutrema salsugineum
Thhalv10027903m.g 2.0kb downstream 2.0kb downstream 3797 true scaffold_14: 3597389-3601185 Eutrema salsugineum
Thhalv10027903m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_14: 3597389-3599388 Eutrema salsugineum
Thhalv10027903m.g 5.0kb upstream 5.0kb upstream 6797 true scaffold_14: 3599389-3606185 Eutrema salsugineum
Thhalv10027903m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_14: 3601186-3606185 Eutrema salsugineum
Thhalv10027903m.g 5.0kb downstream 5.0kb downstream 6797 true scaffold_14: 3594389-3601185 Eutrema salsugineum
Thhalv10027903m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_14: 3594389-3599388 Eutrema salsugineum
Thhalv10027903m.g 10.0kb upstream 10.0kb upstream 11797 true scaffold_14: 3599389-3611185 Eutrema salsugineum
Thhalv10027903m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_14: 3601186-3611185 Eutrema salsugineum
Thhalv10027903m.g 10.0kb downstream 10.0kb downstream 11797 true scaffold_14: 3589389-3601185 Eutrema salsugineum
Thhalv10027903m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_14: 3589389-3599388 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371642 5261 Brassicaceae View MSA
123838534 5264 Brassicales-Malvales View MSA
124322471 5266 SBM View MSA
124251826 5268 Malvidae View MSA
124069750 5270 Rosid View MSA
123746356 5271 Pentapetalae View MSA
122795008 5272 Eudicot View MSA
122042373 5273 Angiosperm View MSA
121350795 5274 Embryophyte View MSA
123428840 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain