Gene : Thhalv10028035m.g E. salsugineum v1.0
Defline:  (1 of 93) KOG0417 - Ubiquitin-protein ligase Genomic Order:  429
Name:  ? Thhalv10028035m.g Secondary Identifier:  ? PAC:20189419
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum PWY-7511 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10028035m.g 0.5kb upstream 0.5kb upstream 1098 true scaffold_14: 5160989-5162086 Eutrema salsugineum
Thhalv10028035m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_14: 5161587-5162086 Eutrema salsugineum
Thhalv10028035m.g 0.5kb downstream 0.5kb downstream 1098 true scaffold_14: 5160489-5161586 Eutrema salsugineum
Thhalv10028035m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_14: 5160489-5160988 Eutrema salsugineum
Thhalv10028035m.g 1.0kb upstream 1.0kb upstream 1598 true scaffold_14: 5160989-5162586 Eutrema salsugineum
Thhalv10028035m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_14: 5161587-5162586 Eutrema salsugineum
Thhalv10028035m.g 1.0kb downstream 1.0kb downstream 1598 true scaffold_14: 5159989-5161586 Eutrema salsugineum
Thhalv10028035m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_14: 5159989-5160988 Eutrema salsugineum
Thhalv10028035m.g 2.0kb upstream 2.0kb upstream 2598 true scaffold_14: 5160989-5163586 Eutrema salsugineum
Thhalv10028035m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_14: 5161587-5163586 Eutrema salsugineum
Thhalv10028035m.g 2.0kb downstream 2.0kb downstream 2598 true scaffold_14: 5158989-5161586 Eutrema salsugineum
Thhalv10028035m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_14: 5158989-5160988 Eutrema salsugineum
Thhalv10028035m.g 5.0kb upstream 5.0kb upstream 5598 true scaffold_14: 5160989-5166586 Eutrema salsugineum
Thhalv10028035m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_14: 5161587-5166586 Eutrema salsugineum
Thhalv10028035m.g 5.0kb downstream 5.0kb downstream 5598 true scaffold_14: 5155989-5161586 Eutrema salsugineum
Thhalv10028035m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_14: 5155989-5160988 Eutrema salsugineum
Thhalv10028035m.g 10.0kb upstream 10.0kb upstream 10598 true scaffold_14: 5160989-5171586 Eutrema salsugineum
Thhalv10028035m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_14: 5161587-5171586 Eutrema salsugineum
Thhalv10028035m.g 10.0kb downstream 10.0kb downstream 10598 true scaffold_14: 5150989-5161586 Eutrema salsugineum
Thhalv10028035m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_14: 5150989-5160988 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122030981 5273 Angiosperm View MSA
122382259 5261 Brassicaceae View MSA
123842039 5264 Brassicales-Malvales View MSA
124323203 5266 SBM View MSA
124255587 5268 Malvidae View MSA
124041272 5270 Rosid View MSA
123647489 5271 Pentapetalae View MSA
122798530 5272 Eudicot View MSA
121351650 5274 Embryophyte View MSA
123428086 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain