Gene : Thhalv10000064m.g E. salsugineum v1.0
Defline:  (1 of 3) PTHR22808 - NCL1 YEAST -RELATED NOL1/NOP2/FMU SUN DOMAIN-CONTAINING Genomic Order:  384
Name:  ? Thhalv10000064m.g Secondary Identifier:  ? PAC:20208531
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum PWY-6829 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10000064m.g 0.5kb upstream 0.5kb upstream 4268 true scaffold_15: 2903489-2907756 Eutrema salsugineum
Thhalv10000064m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_15: 2903489-2903988 Eutrema salsugineum
Thhalv10000064m.g 0.5kb downstream 0.5kb downstream 4268 true scaffold_15: 2903989-2908256 Eutrema salsugineum
Thhalv10000064m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_15: 2907757-2908256 Eutrema salsugineum
Thhalv10000064m.g 1.0kb upstream 1.0kb upstream 4768 true scaffold_15: 2902989-2907756 Eutrema salsugineum
Thhalv10000064m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_15: 2902989-2903988 Eutrema salsugineum
Thhalv10000064m.g 1.0kb downstream 1.0kb downstream 4768 true scaffold_15: 2903989-2908756 Eutrema salsugineum
Thhalv10000064m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_15: 2907757-2908756 Eutrema salsugineum
Thhalv10000064m.g 2.0kb upstream 2.0kb upstream 5768 true scaffold_15: 2901989-2907756 Eutrema salsugineum
Thhalv10000064m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_15: 2901989-2903988 Eutrema salsugineum
Thhalv10000064m.g 2.0kb downstream 2.0kb downstream 5768 true scaffold_15: 2903989-2909756 Eutrema salsugineum
Thhalv10000064m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_15: 2907757-2909756 Eutrema salsugineum
Thhalv10000064m.g 5.0kb upstream 5.0kb upstream 8768 true scaffold_15: 2898989-2907756 Eutrema salsugineum
Thhalv10000064m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_15: 2898989-2903988 Eutrema salsugineum
Thhalv10000064m.g 5.0kb downstream 5.0kb downstream 8768 true scaffold_15: 2903989-2912756 Eutrema salsugineum
Thhalv10000064m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_15: 2907757-2912756 Eutrema salsugineum
Thhalv10000064m.g 10.0kb upstream 10.0kb upstream 13768 true scaffold_15: 2893989-2907756 Eutrema salsugineum
Thhalv10000064m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_15: 2893989-2903988 Eutrema salsugineum
Thhalv10000064m.g 10.0kb downstream 10.0kb downstream 13768 true scaffold_15: 2903989-2917756 Eutrema salsugineum
Thhalv10000064m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_15: 2907757-2917756 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121508623 5273 Angiosperm Singleton cluster - no MSA
122357438 5261 Brassicaceae Singleton cluster - no MSA
123795488 5264 Brassicales-Malvales Singleton cluster - no MSA
124293271 5266 SBM Singleton cluster - no MSA
124145947 5268 Malvidae Singleton cluster - no MSA
123872283 5270 Rosid Singleton cluster - no MSA
123456436 5271 Pentapetalae Singleton cluster - no MSA
122491860 5272 Eudicot Singleton cluster - no MSA
121349940 5274 Embryophyte View MSA
123426394 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain