Gene : Thhalv10000113m.g E. salsugineum v1.0
Defline:  (1 of 1) PTHR21266:SF29 - PROTEIN TIC 55, CHLOROPLASTIC Genomic Order:  479
Name:  ? Thhalv10000113m.g Secondary Identifier:  ? PAC:20208666
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum PWY-5098 Eutrema salsugineum pathologic  
Esalsugineum PWY-6927 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10000113m.g 0.5kb upstream 0.5kb upstream 3436 true scaffold_15: 4212827-4216262 Eutrema salsugineum
Thhalv10000113m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_15: 4212827-4213326 Eutrema salsugineum
Thhalv10000113m.g 0.5kb downstream 0.5kb downstream 3436 true scaffold_15: 4213327-4216762 Eutrema salsugineum
Thhalv10000113m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_15: 4216263-4216762 Eutrema salsugineum
Thhalv10000113m.g 1.0kb upstream 1.0kb upstream 3936 true scaffold_15: 4212327-4216262 Eutrema salsugineum
Thhalv10000113m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_15: 4212327-4213326 Eutrema salsugineum
Thhalv10000113m.g 1.0kb downstream 1.0kb downstream 3936 true scaffold_15: 4213327-4217262 Eutrema salsugineum
Thhalv10000113m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_15: 4216263-4217262 Eutrema salsugineum
Thhalv10000113m.g 2.0kb upstream 2.0kb upstream 4936 true scaffold_15: 4211327-4216262 Eutrema salsugineum
Thhalv10000113m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_15: 4211327-4213326 Eutrema salsugineum
Thhalv10000113m.g 2.0kb downstream 2.0kb downstream 4936 true scaffold_15: 4213327-4218262 Eutrema salsugineum
Thhalv10000113m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_15: 4216263-4218262 Eutrema salsugineum
Thhalv10000113m.g 5.0kb upstream 5.0kb upstream 7936 true scaffold_15: 4208327-4216262 Eutrema salsugineum
Thhalv10000113m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_15: 4208327-4213326 Eutrema salsugineum
Thhalv10000113m.g 5.0kb downstream 5.0kb downstream 7936 true scaffold_15: 4213327-4221262 Eutrema salsugineum
Thhalv10000113m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_15: 4216263-4221262 Eutrema salsugineum
Thhalv10000113m.g 10.0kb upstream 10.0kb upstream 12936 true scaffold_15: 4203327-4216262 Eutrema salsugineum
Thhalv10000113m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_15: 4203327-4213326 Eutrema salsugineum
Thhalv10000113m.g 10.0kb downstream 10.0kb downstream 12936 true scaffold_15: 4213327-4226262 Eutrema salsugineum
Thhalv10000113m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_15: 4216263-4226262 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370406 5261 Brassicaceae View MSA
123833788 5264 Brassicales-Malvales View MSA
124343991 5266 SBM View MSA
124246740 5268 Malvidae View MSA
124068769 5270 Rosid View MSA
123736792 5271 Pentapetalae View MSA
122790775 5272 Eudicot View MSA
122046854 5273 Angiosperm View MSA
123429167 5275 Viridiplantae View MSA
121343903 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain