Gene : Thhalv10010120m.g E. salsugineum v1.0
Defline:  (1 of 1) PTHR20852:SF16 - TYPE-1 GLUTAMINE SYNTHETASE 1 Genomic Order:  271
Name:  ? Thhalv10010120m.g Secondary Identifier:  ? PAC:20207204
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum GLNSYN-PWY Eutrema salsugineum pathologic  
Esalsugineum PWY-3282 Eutrema salsugineum pathologic  
Esalsugineum PWY-381 Eutrema salsugineum pathologic  
Esalsugineum PWY-6549 Eutrema salsugineum pathologic  
Esalsugineum PWY-6963 Eutrema salsugineum pathologic  
Esalsugineum PWY-6964 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10010120m.g 0.5kb upstream 0.5kb upstream 4984 true scaffold_16: 1200089-1205072 Eutrema salsugineum
Thhalv10010120m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_16: 1204573-1205072 Eutrema salsugineum
Thhalv10010120m.g 0.5kb downstream 0.5kb downstream 4984 true scaffold_16: 1199589-1204572 Eutrema salsugineum
Thhalv10010120m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_16: 1199589-1200088 Eutrema salsugineum
Thhalv10010120m.g 1.0kb upstream 1.0kb upstream 5484 true scaffold_16: 1200089-1205572 Eutrema salsugineum
Thhalv10010120m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_16: 1204573-1205572 Eutrema salsugineum
Thhalv10010120m.g 1.0kb downstream 1.0kb downstream 5484 true scaffold_16: 1199089-1204572 Eutrema salsugineum
Thhalv10010120m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_16: 1199089-1200088 Eutrema salsugineum
Thhalv10010120m.g 2.0kb upstream 2.0kb upstream 6484 true scaffold_16: 1200089-1206572 Eutrema salsugineum
Thhalv10010120m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_16: 1204573-1206572 Eutrema salsugineum
Thhalv10010120m.g 2.0kb downstream 2.0kb downstream 6484 true scaffold_16: 1198089-1204572 Eutrema salsugineum
Thhalv10010120m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_16: 1198089-1200088 Eutrema salsugineum
Thhalv10010120m.g 5.0kb upstream 5.0kb upstream 9484 true scaffold_16: 1200089-1209572 Eutrema salsugineum
Thhalv10010120m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_16: 1204573-1209572 Eutrema salsugineum
Thhalv10010120m.g 5.0kb downstream 5.0kb downstream 9484 true scaffold_16: 1195089-1204572 Eutrema salsugineum
Thhalv10010120m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_16: 1195089-1200088 Eutrema salsugineum
Thhalv10010120m.g 10.0kb upstream 10.0kb upstream 14484 true scaffold_16: 1200089-1214572 Eutrema salsugineum
Thhalv10010120m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_16: 1204573-1214572 Eutrema salsugineum
Thhalv10010120m.g 10.0kb downstream 10.0kb downstream 14484 true scaffold_16: 1190089-1204572 Eutrema salsugineum
Thhalv10010120m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_16: 1190089-1200088 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370921 5261 Brassicaceae View MSA
123830288 5264 Brassicales-Malvales View MSA
124344097 5266 SBM View MSA
124252817 5268 Malvidae View MSA
124062784 5270 Rosid View MSA
123749163 5271 Pentapetalae View MSA
122791802 5272 Eudicot View MSA
122046045 5273 Angiosperm View MSA
121348529 5274 Embryophyte View MSA
123428524 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain