Gene : Thhalv10010131m.g E. salsugineum v1.0
Defline:  (1 of 1) PTHR13468:SF6 - DEK DOMAIN-CONTAINING CHROMATIN ASSOCIATED PROTEIN Genomic Order:  724
Name:  ? Thhalv10010131m.g Secondary Identifier:  ? PAC:20207038
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum PWY-7120 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10010131m.g 0.5kb upstream 0.5kb upstream 8088 true scaffold_16: 3446789-3454876 Eutrema salsugineum
Thhalv10010131m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_16: 3454377-3454876 Eutrema salsugineum
Thhalv10010131m.g 0.5kb downstream 0.5kb downstream 8088 true scaffold_16: 3446289-3454376 Eutrema salsugineum
Thhalv10010131m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_16: 3446289-3446788 Eutrema salsugineum
Thhalv10010131m.g 1.0kb upstream 1.0kb upstream 8588 true scaffold_16: 3446789-3455376 Eutrema salsugineum
Thhalv10010131m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_16: 3454377-3455376 Eutrema salsugineum
Thhalv10010131m.g 1.0kb downstream 1.0kb downstream 8588 true scaffold_16: 3445789-3454376 Eutrema salsugineum
Thhalv10010131m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_16: 3445789-3446788 Eutrema salsugineum
Thhalv10010131m.g 2.0kb upstream 2.0kb upstream 9588 true scaffold_16: 3446789-3456376 Eutrema salsugineum
Thhalv10010131m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_16: 3454377-3456376 Eutrema salsugineum
Thhalv10010131m.g 2.0kb downstream 2.0kb downstream 9588 true scaffold_16: 3444789-3454376 Eutrema salsugineum
Thhalv10010131m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_16: 3444789-3446788 Eutrema salsugineum
Thhalv10010131m.g 5.0kb upstream 5.0kb upstream 12588 true scaffold_16: 3446789-3459376 Eutrema salsugineum
Thhalv10010131m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_16: 3454377-3459376 Eutrema salsugineum
Thhalv10010131m.g 5.0kb downstream 5.0kb downstream 12588 true scaffold_16: 3441789-3454376 Eutrema salsugineum
Thhalv10010131m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_16: 3441789-3446788 Eutrema salsugineum
Thhalv10010131m.g 10.0kb upstream 10.0kb upstream 17588 true scaffold_16: 3446789-3464376 Eutrema salsugineum
Thhalv10010131m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_16: 3454377-3464376 Eutrema salsugineum
Thhalv10010131m.g 10.0kb downstream 10.0kb downstream 17588 true scaffold_16: 3436789-3454376 Eutrema salsugineum
Thhalv10010131m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_16: 3436789-3446788 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122359670 5261 Brassicaceae View MSA
123797519 5264 Brassicales-Malvales View MSA
124295240 5266 SBM View MSA
124147695 5268 Malvidae View MSA
124072894 5270 Rosid View MSA
123748946 5271 Pentapetalae View MSA
122791456 5272 Eudicot View MSA
122042773 5273 Angiosperm View MSA
121346519 5274 Embryophyte View MSA
123426401 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain