Gene : Thhalv10010139m.g E. salsugineum v1.0
Defline:  (1 of 1) PTHR23315:SF119 - U-BOX DOMAIN-CONTAINING PROTEIN 3 Genomic Order:  116
Name:  ? Thhalv10010139m.g Secondary Identifier:  ? PAC:20206972
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum PWY-7511 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10010139m.g 0.5kb upstream 0.5kb upstream 4687 true scaffold_16: 543463-548149 Eutrema salsugineum
Thhalv10010139m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_16: 543463-543962 Eutrema salsugineum
Thhalv10010139m.g 0.5kb downstream 0.5kb downstream 4687 true scaffold_16: 543963-548649 Eutrema salsugineum
Thhalv10010139m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_16: 548150-548649 Eutrema salsugineum
Thhalv10010139m.g 1.0kb upstream 1.0kb upstream 5187 true scaffold_16: 542963-548149 Eutrema salsugineum
Thhalv10010139m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_16: 542963-543962 Eutrema salsugineum
Thhalv10010139m.g 1.0kb downstream 1.0kb downstream 5187 true scaffold_16: 543963-549149 Eutrema salsugineum
Thhalv10010139m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_16: 548150-549149 Eutrema salsugineum
Thhalv10010139m.g 2.0kb upstream 2.0kb upstream 6187 true scaffold_16: 541963-548149 Eutrema salsugineum
Thhalv10010139m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_16: 541963-543962 Eutrema salsugineum
Thhalv10010139m.g 2.0kb downstream 2.0kb downstream 6187 true scaffold_16: 543963-550149 Eutrema salsugineum
Thhalv10010139m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_16: 548150-550149 Eutrema salsugineum
Thhalv10010139m.g 5.0kb upstream 5.0kb upstream 9187 true scaffold_16: 538963-548149 Eutrema salsugineum
Thhalv10010139m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_16: 538963-543962 Eutrema salsugineum
Thhalv10010139m.g 5.0kb downstream 5.0kb downstream 9187 true scaffold_16: 543963-553149 Eutrema salsugineum
Thhalv10010139m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_16: 548150-553149 Eutrema salsugineum
Thhalv10010139m.g 10.0kb upstream 10.0kb upstream 14187 true scaffold_16: 533963-548149 Eutrema salsugineum
Thhalv10010139m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_16: 533963-543962 Eutrema salsugineum
Thhalv10010139m.g 10.0kb downstream 10.0kb downstream 14187 true scaffold_16: 543963-558149 Eutrema salsugineum
Thhalv10010139m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_16: 548150-558149 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372135 5261 Brassicaceae View MSA
123829079 5264 Brassicales-Malvales View MSA
124344336 5266 SBM View MSA
124243678 5268 Malvidae View MSA
124067773 5270 Rosid View MSA
123748124 5271 Pentapetalae View MSA
122789337 5272 Eudicot View MSA
122048814 5273 Angiosperm View MSA
121345933 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain