Gene : Thhalv10010220m.g E. salsugineum v1.0
Defline:  (1 of 2) PTHR31707:SF8 - PECTINESTERASE/PECTINESTERASE INHIBITOR 34-RELATED Genomic Order:  668
Name:  ? Thhalv10010220m.g Secondary Identifier:  ? PAC:20207852
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum PWY-1081 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10010220m.g 0.5kb upstream 0.5kb upstream 4677 true scaffold_16: 3139958-3144634 Eutrema salsugineum
Thhalv10010220m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_16: 3144135-3144634 Eutrema salsugineum
Thhalv10010220m.g 0.5kb downstream 0.5kb downstream 4677 true scaffold_16: 3139458-3144134 Eutrema salsugineum
Thhalv10010220m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_16: 3139458-3139957 Eutrema salsugineum
Thhalv10010220m.g 1.0kb upstream 1.0kb upstream 5177 true scaffold_16: 3139958-3145134 Eutrema salsugineum
Thhalv10010220m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_16: 3144135-3145134 Eutrema salsugineum
Thhalv10010220m.g 1.0kb downstream 1.0kb downstream 5177 true scaffold_16: 3138958-3144134 Eutrema salsugineum
Thhalv10010220m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_16: 3138958-3139957 Eutrema salsugineum
Thhalv10010220m.g 2.0kb upstream 2.0kb upstream 6177 true scaffold_16: 3139958-3146134 Eutrema salsugineum
Thhalv10010220m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_16: 3144135-3146134 Eutrema salsugineum
Thhalv10010220m.g 2.0kb downstream 2.0kb downstream 6177 true scaffold_16: 3137958-3144134 Eutrema salsugineum
Thhalv10010220m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_16: 3137958-3139957 Eutrema salsugineum
Thhalv10010220m.g 5.0kb upstream 5.0kb upstream 9177 true scaffold_16: 3139958-3149134 Eutrema salsugineum
Thhalv10010220m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_16: 3144135-3149134 Eutrema salsugineum
Thhalv10010220m.g 5.0kb downstream 5.0kb downstream 9177 true scaffold_16: 3134958-3144134 Eutrema salsugineum
Thhalv10010220m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_16: 3134958-3139957 Eutrema salsugineum
Thhalv10010220m.g 10.0kb upstream 10.0kb upstream 14177 true scaffold_16: 3139958-3154134 Eutrema salsugineum
Thhalv10010220m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_16: 3144135-3154134 Eutrema salsugineum
Thhalv10010220m.g 10.0kb downstream 10.0kb downstream 14177 true scaffold_16: 3129958-3144134 Eutrema salsugineum
Thhalv10010220m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_16: 3129958-3139957 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381406 5261 Brassicaceae View MSA
123838000 5264 Brassicales-Malvales View MSA
124337628 5266 SBM View MSA
124239188 5268 Malvidae View MSA
124065220 5270 Rosid View MSA
123746199 5271 Pentapetalae View MSA
122794152 5272 Eudicot View MSA
122043800 5273 Angiosperm View MSA
121350573 5274 Embryophyte View MSA
123381802 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain