Gene : Thhalv10010095m.g E. salsugineum v1.0
Defline:  (1 of 2) 1.2.4.2 - Oxoglutarate dehydrogenase (succinyl-transferring) / Oxoglutarate dehydrogenase (lipoamide) Genomic Order:  55
Name:  ? Thhalv10010095m.g Secondary Identifier:  ? PAC:20206898
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum PWY-5084 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10010095m.g 0.5kb upstream 0.5kb upstream 5018 true scaffold_16: 266032-271049 Eutrema salsugineum
Thhalv10010095m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_16: 270550-271049 Eutrema salsugineum
Thhalv10010095m.g 0.5kb downstream 0.5kb downstream 5018 true scaffold_16: 265532-270549 Eutrema salsugineum
Thhalv10010095m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_16: 265532-266031 Eutrema salsugineum
Thhalv10010095m.g 1.0kb upstream 1.0kb upstream 5518 true scaffold_16: 266032-271549 Eutrema salsugineum
Thhalv10010095m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_16: 270550-271549 Eutrema salsugineum
Thhalv10010095m.g 1.0kb downstream 1.0kb downstream 5518 true scaffold_16: 265032-270549 Eutrema salsugineum
Thhalv10010095m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_16: 265032-266031 Eutrema salsugineum
Thhalv10010095m.g 2.0kb upstream 2.0kb upstream 6518 true scaffold_16: 266032-272549 Eutrema salsugineum
Thhalv10010095m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_16: 270550-272549 Eutrema salsugineum
Thhalv10010095m.g 2.0kb downstream 2.0kb downstream 6518 true scaffold_16: 264032-270549 Eutrema salsugineum
Thhalv10010095m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_16: 264032-266031 Eutrema salsugineum
Thhalv10010095m.g 5.0kb upstream 5.0kb upstream 9518 true scaffold_16: 266032-275549 Eutrema salsugineum
Thhalv10010095m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_16: 270550-275549 Eutrema salsugineum
Thhalv10010095m.g 5.0kb downstream 5.0kb downstream 9518 true scaffold_16: 261032-270549 Eutrema salsugineum
Thhalv10010095m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_16: 261032-266031 Eutrema salsugineum
Thhalv10010095m.g 10.0kb upstream 10.0kb upstream 14518 true scaffold_16: 266032-280549 Eutrema salsugineum
Thhalv10010095m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_16: 270550-280549 Eutrema salsugineum
Thhalv10010095m.g 10.0kb downstream 10.0kb downstream 14518 true scaffold_16: 256032-270549 Eutrema salsugineum
Thhalv10010095m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_16: 256032-266031 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377331 5261 Brassicaceae View MSA
123838611 5264 Brassicales-Malvales View MSA
124343365 5266 SBM View MSA
124239767 5268 Malvidae View MSA
124067534 5270 Rosid View MSA
123744941 5271 Pentapetalae View MSA
122793820 5272 Eudicot View MSA
122044869 5273 Angiosperm View MSA
121344749 5274 Embryophyte View MSA
123424102 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain