Gene : Thhalv10010545m.g E. salsugineum v1.0

Defline:  (1 of 1) KOG0121//KOG0131//KOG0144 - Nuclear cap-binding protein complex, subunit CBP20 (RRM superfamily) // Splicing factor 3b, subunit 4 // RNA-binding protein CUGBP1/BRUNO (RRM superfamily) Genomic Order:  243
Name:  ? Thhalv10010545m.g Secondary Identifier:  ? PAC:20207411

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10010545m.g 0.5kb upstream 0.5kb upstream 2635 true scaffold_16: 1075266-1077900 Eutrema salsugineum
Thhalv10010545m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_16: 1075266-1075765 Eutrema salsugineum
Thhalv10010545m.g 0.5kb downstream 0.5kb downstream 2635 true scaffold_16: 1075766-1078400 Eutrema salsugineum
Thhalv10010545m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_16: 1077901-1078400 Eutrema salsugineum
Thhalv10010545m.g 1.0kb upstream 1.0kb upstream 3135 true scaffold_16: 1074766-1077900 Eutrema salsugineum
Thhalv10010545m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_16: 1074766-1075765 Eutrema salsugineum
Thhalv10010545m.g 1.0kb downstream 1.0kb downstream 3135 true scaffold_16: 1075766-1078900 Eutrema salsugineum
Thhalv10010545m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_16: 1077901-1078900 Eutrema salsugineum
Thhalv10010545m.g 2.0kb upstream 2.0kb upstream 4135 true scaffold_16: 1073766-1077900 Eutrema salsugineum
Thhalv10010545m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_16: 1073766-1075765 Eutrema salsugineum
Thhalv10010545m.g 2.0kb downstream 2.0kb downstream 4135 true scaffold_16: 1075766-1079900 Eutrema salsugineum
Thhalv10010545m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_16: 1077901-1079900 Eutrema salsugineum
Thhalv10010545m.g 5.0kb upstream 5.0kb upstream 7135 true scaffold_16: 1070766-1077900 Eutrema salsugineum
Thhalv10010545m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_16: 1070766-1075765 Eutrema salsugineum
Thhalv10010545m.g 5.0kb downstream 5.0kb downstream 7135 true scaffold_16: 1075766-1082900 Eutrema salsugineum
Thhalv10010545m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_16: 1077901-1082900 Eutrema salsugineum
Thhalv10010545m.g 10.0kb upstream 10.0kb upstream 12135 true scaffold_16: 1065766-1077900 Eutrema salsugineum
Thhalv10010545m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_16: 1065766-1075765 Eutrema salsugineum
Thhalv10010545m.g 10.0kb downstream 10.0kb downstream 12135 true scaffold_16: 1075766-1087900 Eutrema salsugineum
Thhalv10010545m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_16: 1077901-1087900 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040882 5273 Angiosperm View MSA
122366081 5261 Brassicaceae View MSA
123799104 5264 Brassicales-Malvales View MSA
124296656 5266 SBM View MSA
124148746 5268 Malvidae View MSA
123874684 5270 Rosid View MSA
123739756 5271 Pentapetalae View MSA
122769963 5272 Eudicot View MSA
123429142 5275 Viridiplantae View MSA
121349812 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain