Gene : Thhalv10010528m.g E. salsugineum v1.0

Defline:  (1 of 3) PTHR26312:SF76 - TETRATRICOPEPTIDE REPEAT DOMAIN-CONTAINING PROTEIN Genomic Order:  234
Name:  ? Thhalv10010528m.g Secondary Identifier:  ? PAC:20207577

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10010528m.g 0.5kb upstream 0.5kb upstream 1854 true scaffold_16: 1033929-1035782 Eutrema salsugineum
Thhalv10010528m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_16: 1033929-1034428 Eutrema salsugineum
Thhalv10010528m.g 0.5kb downstream 0.5kb downstream 1854 true scaffold_16: 1034429-1036282 Eutrema salsugineum
Thhalv10010528m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_16: 1035783-1036282 Eutrema salsugineum
Thhalv10010528m.g 1.0kb upstream 1.0kb upstream 2354 true scaffold_16: 1033429-1035782 Eutrema salsugineum
Thhalv10010528m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_16: 1033429-1034428 Eutrema salsugineum
Thhalv10010528m.g 1.0kb downstream 1.0kb downstream 2354 true scaffold_16: 1034429-1036782 Eutrema salsugineum
Thhalv10010528m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_16: 1035783-1036782 Eutrema salsugineum
Thhalv10010528m.g 2.0kb upstream 2.0kb upstream 3354 true scaffold_16: 1032429-1035782 Eutrema salsugineum
Thhalv10010528m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_16: 1032429-1034428 Eutrema salsugineum
Thhalv10010528m.g 2.0kb downstream 2.0kb downstream 3354 true scaffold_16: 1034429-1037782 Eutrema salsugineum
Thhalv10010528m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_16: 1035783-1037782 Eutrema salsugineum
Thhalv10010528m.g 5.0kb upstream 5.0kb upstream 6354 true scaffold_16: 1029429-1035782 Eutrema salsugineum
Thhalv10010528m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_16: 1029429-1034428 Eutrema salsugineum
Thhalv10010528m.g 5.0kb downstream 5.0kb downstream 6354 true scaffold_16: 1034429-1040782 Eutrema salsugineum
Thhalv10010528m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_16: 1035783-1040782 Eutrema salsugineum
Thhalv10010528m.g 10.0kb upstream 10.0kb upstream 11354 true scaffold_16: 1024429-1035782 Eutrema salsugineum
Thhalv10010528m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_16: 1024429-1034428 Eutrema salsugineum
Thhalv10010528m.g 10.0kb downstream 10.0kb downstream 11354 true scaffold_16: 1034429-1045782 Eutrema salsugineum
Thhalv10010528m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_16: 1035783-1045782 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370983 5261 Brassicaceae View MSA
123840752 5264 Brassicales-Malvales View MSA
124338803 5266 SBM View MSA
124237294 5268 Malvidae View MSA
124062008 5270 Rosid View MSA
123737830 5271 Pentapetalae View MSA
122791127 5272 Eudicot View MSA
122050724 5273 Angiosperm View MSA
121348352 5274 Embryophyte View MSA
123426406 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain