Gene : Thhalv10010477m.g E. salsugineum v1.0
Defline:  (1 of 2) PTHR31689:SF0 - DIAMINOPIMELATE EPIMERASE, CHLOROPLASTIC Genomic Order:  232
Name:  ? Thhalv10010477m.g Secondary Identifier:  ? PAC:20206825
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum PWY-5097 Eutrema salsugineum pathologic  
Esalsugineum PWY-724 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10010477m.g 0.5kb upstream 0.5kb upstream 2678 true scaffold_16: 1028501-1031178 Eutrema salsugineum
Thhalv10010477m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_16: 1030679-1031178 Eutrema salsugineum
Thhalv10010477m.g 0.5kb downstream 0.5kb downstream 2678 true scaffold_16: 1028001-1030678 Eutrema salsugineum
Thhalv10010477m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_16: 1028001-1028500 Eutrema salsugineum
Thhalv10010477m.g 1.0kb upstream 1.0kb upstream 3178 true scaffold_16: 1028501-1031678 Eutrema salsugineum
Thhalv10010477m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_16: 1030679-1031678 Eutrema salsugineum
Thhalv10010477m.g 1.0kb downstream 1.0kb downstream 3178 true scaffold_16: 1027501-1030678 Eutrema salsugineum
Thhalv10010477m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_16: 1027501-1028500 Eutrema salsugineum
Thhalv10010477m.g 2.0kb upstream 2.0kb upstream 4178 true scaffold_16: 1028501-1032678 Eutrema salsugineum
Thhalv10010477m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_16: 1030679-1032678 Eutrema salsugineum
Thhalv10010477m.g 2.0kb downstream 2.0kb downstream 4178 true scaffold_16: 1026501-1030678 Eutrema salsugineum
Thhalv10010477m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_16: 1026501-1028500 Eutrema salsugineum
Thhalv10010477m.g 5.0kb upstream 5.0kb upstream 7178 true scaffold_16: 1028501-1035678 Eutrema salsugineum
Thhalv10010477m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_16: 1030679-1035678 Eutrema salsugineum
Thhalv10010477m.g 5.0kb downstream 5.0kb downstream 7178 true scaffold_16: 1023501-1030678 Eutrema salsugineum
Thhalv10010477m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_16: 1023501-1028500 Eutrema salsugineum
Thhalv10010477m.g 10.0kb upstream 10.0kb upstream 12178 true scaffold_16: 1028501-1040678 Eutrema salsugineum
Thhalv10010477m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_16: 1030679-1040678 Eutrema salsugineum
Thhalv10010477m.g 10.0kb downstream 10.0kb downstream 12178 true scaffold_16: 1018501-1030678 Eutrema salsugineum
Thhalv10010477m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_16: 1018501-1028500 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373276 5261 Brassicaceae View MSA
123838616 5264 Brassicales-Malvales View MSA
124341400 5266 SBM View MSA
124243364 5268 Malvidae View MSA
124061653 5270 Rosid View MSA
123740208 5271 Pentapetalae View MSA
122785704 5272 Eudicot View MSA
122047257 5273 Angiosperm View MSA
121347599 5274 Embryophyte View MSA
123423863 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain