Gene : Thhalv10003169m.g E. salsugineum v1.0
Defline:  (1 of 2) PTHR11455:SF24 - CRYPTOCHROME-1 Genomic Order:  140
Name:  ? Thhalv10003169m.g Secondary Identifier:  ? PAC:20208192
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10003169m.g 0.5kb upstream 0.5kb upstream 2774 true scaffold_17: 1979551-1982324 Eutrema salsugineum
Thhalv10003169m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_17: 1981825-1982324 Eutrema salsugineum
Thhalv10003169m.g 0.5kb downstream 0.5kb downstream 2774 true scaffold_17: 1979051-1981824 Eutrema salsugineum
Thhalv10003169m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_17: 1979051-1979550 Eutrema salsugineum
Thhalv10003169m.g 1.0kb upstream 1.0kb upstream 3274 true scaffold_17: 1979551-1982824 Eutrema salsugineum
Thhalv10003169m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_17: 1981825-1982824 Eutrema salsugineum
Thhalv10003169m.g 1.0kb downstream 1.0kb downstream 3274 true scaffold_17: 1978551-1981824 Eutrema salsugineum
Thhalv10003169m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_17: 1978551-1979550 Eutrema salsugineum
Thhalv10003169m.g 2.0kb upstream 2.0kb upstream 4274 true scaffold_17: 1979551-1983824 Eutrema salsugineum
Thhalv10003169m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_17: 1981825-1983824 Eutrema salsugineum
Thhalv10003169m.g 2.0kb downstream 2.0kb downstream 4274 true scaffold_17: 1977551-1981824 Eutrema salsugineum
Thhalv10003169m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_17: 1977551-1979550 Eutrema salsugineum
Thhalv10003169m.g 5.0kb upstream 5.0kb upstream 7274 true scaffold_17: 1979551-1986824 Eutrema salsugineum
Thhalv10003169m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_17: 1981825-1986824 Eutrema salsugineum
Thhalv10003169m.g 5.0kb downstream 5.0kb downstream 7274 true scaffold_17: 1974551-1981824 Eutrema salsugineum
Thhalv10003169m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_17: 1974551-1979550 Eutrema salsugineum
Thhalv10003169m.g 10.0kb upstream 10.0kb upstream 12274 true scaffold_17: 1979551-1991824 Eutrema salsugineum
Thhalv10003169m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_17: 1981825-1991824 Eutrema salsugineum
Thhalv10003169m.g 10.0kb downstream 10.0kb downstream 12274 true scaffold_17: 1969551-1981824 Eutrema salsugineum
Thhalv10003169m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_17: 1969551-1979550 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122357673 5261 Brassicaceae Singleton cluster - no MSA
123795700 5264 Brassicales-Malvales Singleton cluster - no MSA
124293482 5266 SBM Singleton cluster - no MSA
124146124 5268 Malvidae Singleton cluster - no MSA
123872445 5270 Rosid Singleton cluster - no MSA
123456592 5271 Pentapetalae Singleton cluster - no MSA
122492015 5272 Eudicot Singleton cluster - no MSA
122048329 5273 Angiosperm View MSA
121343845 5274 Embryophyte View MSA
123428792 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain