Gene : Thhalv10003154m.g E. salsugineum v1.0
Defline:  (1 of 2) PTHR17204:SF5 - PRE-MRNA-PROCESSING FACTOR 39 Genomic Order:  51
Name:  ? Thhalv10003154m.g Secondary Identifier:  ? PAC:20208117
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10003154m.g 0.5kb upstream 0.5kb upstream 6013 true scaffold_17: 406890-412902 Eutrema salsugineum
Thhalv10003154m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_17: 406890-407389 Eutrema salsugineum
Thhalv10003154m.g 0.5kb downstream 0.5kb downstream 6013 true scaffold_17: 407390-413402 Eutrema salsugineum
Thhalv10003154m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_17: 412903-413402 Eutrema salsugineum
Thhalv10003154m.g 1.0kb upstream 1.0kb upstream 6513 true scaffold_17: 406390-412902 Eutrema salsugineum
Thhalv10003154m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_17: 406390-407389 Eutrema salsugineum
Thhalv10003154m.g 1.0kb downstream 1.0kb downstream 6513 true scaffold_17: 407390-413902 Eutrema salsugineum
Thhalv10003154m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_17: 412903-413902 Eutrema salsugineum
Thhalv10003154m.g 2.0kb upstream 2.0kb upstream 7513 true scaffold_17: 405390-412902 Eutrema salsugineum
Thhalv10003154m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_17: 405390-407389 Eutrema salsugineum
Thhalv10003154m.g 2.0kb downstream 2.0kb downstream 7513 true scaffold_17: 407390-414902 Eutrema salsugineum
Thhalv10003154m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_17: 412903-414902 Eutrema salsugineum
Thhalv10003154m.g 5.0kb upstream 5.0kb upstream 10513 true scaffold_17: 402390-412902 Eutrema salsugineum
Thhalv10003154m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_17: 402390-407389 Eutrema salsugineum
Thhalv10003154m.g 5.0kb downstream 5.0kb downstream 10513 true scaffold_17: 407390-417902 Eutrema salsugineum
Thhalv10003154m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_17: 412903-417902 Eutrema salsugineum
Thhalv10003154m.g 10.0kb upstream 10.0kb upstream 15513 true scaffold_17: 397390-412902 Eutrema salsugineum
Thhalv10003154m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_17: 397390-407389 Eutrema salsugineum
Thhalv10003154m.g 10.0kb downstream 10.0kb downstream 15513 true scaffold_17: 407390-422902 Eutrema salsugineum
Thhalv10003154m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_17: 412903-422902 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122357660 5261 Brassicaceae Singleton cluster - no MSA
123795688 5264 Brassicales-Malvales Singleton cluster - no MSA
124293470 5266 SBM Singleton cluster - no MSA
124146112 5268 Malvidae Singleton cluster - no MSA
123872433 5270 Rosid Singleton cluster - no MSA
123746236 5271 Pentapetalae View MSA
122794509 5272 Eudicot View MSA
122048891 5273 Angiosperm View MSA
121349849 5274 Embryophyte View MSA
123426942 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain