Gene : Thhalv10003208m.g E. salsugineum v1.0
Defline:  (1 of 71) PF02458 - Transferase family (Transferase) Genomic Order:  214
Name:  ? Thhalv10003208m.g Secondary Identifier:  ? PAC:20208212
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum PWY-361 Eutrema salsugineum pathologic  
Esalsugineum PWY-6039 Eutrema salsugineum pathologic  
Esalsugineum PWY-6040 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10003208m.g 0.5kb upstream 0.5kb upstream 3843 true scaffold_17: 3681315-3685157 Eutrema salsugineum
Thhalv10003208m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_17: 3684658-3685157 Eutrema salsugineum
Thhalv10003208m.g 0.5kb downstream 0.5kb downstream 3843 true scaffold_17: 3680815-3684657 Eutrema salsugineum
Thhalv10003208m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_17: 3680815-3681314 Eutrema salsugineum
Thhalv10003208m.g 1.0kb upstream 1.0kb upstream 4343 true scaffold_17: 3681315-3685657 Eutrema salsugineum
Thhalv10003208m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_17: 3684658-3685657 Eutrema salsugineum
Thhalv10003208m.g 1.0kb downstream 1.0kb downstream 4343 true scaffold_17: 3680315-3684657 Eutrema salsugineum
Thhalv10003208m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_17: 3680315-3681314 Eutrema salsugineum
Thhalv10003208m.g 2.0kb upstream 2.0kb upstream 5343 true scaffold_17: 3681315-3686657 Eutrema salsugineum
Thhalv10003208m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_17: 3684658-3686657 Eutrema salsugineum
Thhalv10003208m.g 2.0kb downstream 2.0kb downstream 5343 true scaffold_17: 3679315-3684657 Eutrema salsugineum
Thhalv10003208m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_17: 3679315-3681314 Eutrema salsugineum
Thhalv10003208m.g 5.0kb upstream 5.0kb upstream 8343 true scaffold_17: 3681315-3689657 Eutrema salsugineum
Thhalv10003208m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_17: 3684658-3689657 Eutrema salsugineum
Thhalv10003208m.g 5.0kb downstream 5.0kb downstream 8343 true scaffold_17: 3676315-3684657 Eutrema salsugineum
Thhalv10003208m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_17: 3676315-3681314 Eutrema salsugineum
Thhalv10003208m.g 10.0kb upstream 10.0kb upstream 13343 true scaffold_17: 3681315-3694657 Eutrema salsugineum
Thhalv10003208m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_17: 3684658-3694657 Eutrema salsugineum
Thhalv10003208m.g 10.0kb downstream 10.0kb downstream 13343 true scaffold_17: 3671315-3684657 Eutrema salsugineum
Thhalv10003208m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_17: 3671315-3681314 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364120 5261 Brassicaceae View MSA
123837047 5264 Brassicales-Malvales View MSA
124344144 5266 SBM View MSA
124238828 5268 Malvidae View MSA
124068484 5270 Rosid View MSA
123747860 5271 Pentapetalae View MSA
122791254 5272 Eudicot View MSA
122051643 5273 Angiosperm View MSA
121350983 5274 Embryophyte View MSA
123428782 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain