Gene : Thhalv10011034m.g E. salsugineum v1.0
Defline:  (1 of 1) PTHR22855:SF15 - ACETYL-COENZYME A CARBOXYLASE CARBOXYL TRANSFERASE SUBUNIT BETA, CHLOROPLASTIC Genomic Order:  968
Name:  ? Thhalv10011034m.g Secondary Identifier:  ? PAC:20207493
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum PWY0-1264 Eutrema salsugineum pathologic  
Esalsugineum PWY-4381 Eutrema salsugineum pathologic  
Esalsugineum PWY-5156 Eutrema salsugineum pathologic  
Esalsugineum PWY-7388 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10011034m.g 0.5kb upstream 0.5kb upstream 1907 true scaffold_16: 5906654-5908560 Eutrema salsugineum
Thhalv10011034m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_16: 5908061-5908560 Eutrema salsugineum
Thhalv10011034m.g 0.5kb downstream 0.5kb downstream 1907 true scaffold_16: 5906154-5908060 Eutrema salsugineum
Thhalv10011034m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_16: 5906154-5906653 Eutrema salsugineum
Thhalv10011034m.g 1.0kb upstream 1.0kb upstream 2407 true scaffold_16: 5906654-5909060 Eutrema salsugineum
Thhalv10011034m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_16: 5908061-5909060 Eutrema salsugineum
Thhalv10011034m.g 1.0kb downstream 1.0kb downstream 2407 true scaffold_16: 5905654-5908060 Eutrema salsugineum
Thhalv10011034m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_16: 5905654-5906653 Eutrema salsugineum
Thhalv10011034m.g 2.0kb upstream 2.0kb upstream 3407 true scaffold_16: 5906654-5910060 Eutrema salsugineum
Thhalv10011034m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_16: 5908061-5910060 Eutrema salsugineum
Thhalv10011034m.g 2.0kb downstream 2.0kb downstream 3407 true scaffold_16: 5904654-5908060 Eutrema salsugineum
Thhalv10011034m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_16: 5904654-5906653 Eutrema salsugineum
Thhalv10011034m.g 5.0kb upstream 5.0kb upstream 6407 true scaffold_16: 5906654-5913060 Eutrema salsugineum
Thhalv10011034m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_16: 5908061-5913060 Eutrema salsugineum
Thhalv10011034m.g 5.0kb downstream 5.0kb downstream 6407 true scaffold_16: 5901654-5908060 Eutrema salsugineum
Thhalv10011034m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_16: 5901654-5906653 Eutrema salsugineum
Thhalv10011034m.g 10.0kb upstream 10.0kb upstream 11407 true scaffold_16: 5906654-5918060 Eutrema salsugineum
Thhalv10011034m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_16: 5908061-5918060 Eutrema salsugineum
Thhalv10011034m.g 10.0kb downstream 10.0kb downstream 11407 true scaffold_16: 5896654-5908060 Eutrema salsugineum
Thhalv10011034m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_16: 5896654-5906653 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377414 5261 Brassicaceae View MSA
123832931 5264 Brassicales-Malvales View MSA
124321832 5266 SBM View MSA
124245266 5268 Malvidae View MSA
124050309 5270 Rosid View MSA
123748831 5271 Pentapetalae View MSA
122795112 5272 Eudicot View MSA
122046539 5273 Angiosperm View MSA
121351197 5274 Embryophyte View MSA
123425549 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain